KEGG   Cryptococcus deneoformans B-3501A: CNBE5120
Entry
CNBE5120          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03020  RNA polymerase
cnb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNBE5120
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNBE5120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnb03021]
    CNBE5120
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBE5120
Transcription machinery [BR:cnb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     CNBE5120
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNBE5120
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac MZB Pico_P2A
Other DBs
NCBI-GeneID: 4936524
NCBI-ProteinID: XP_775239
LinkDB
Position
5:complement(1389907..1391346)
AA seq 377 aa
MNGYYDPQQHQSTNIEIPQGPTNQPRLLLRNLNETDATFHLSGVELAYANSLRRVMMADV
PTIAIDQVLFMQNTTPLADEMIAHRLGLIPLISRNVSKGLRYTRDCDCDEGCYYCMVTLR
LKVTFSGNDGEQFMRVTSDMLEVVPSPGGPPPPNPYGPPPELSEEDRIIINNRDPEMGQP
IGKGNPTVPPILIAKMGKGQEIDVLCKAYKGIAKHHAKWSPLSTVAFEYDPYNKLRHTTH
WFETDERAEWPLSSNAAFETPPNPAEPFDYNAVPSTFYFSAESVGSIPVRSVVEQGLDLL
IEGLANVVLGVQKEIGGEEEEGEDGAAADGVVGDGMGVGMGGGLVEPNIPAGIGQDQMAM
AGGYGGYGSQQGYGGSW
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaacggatactacgacccccaacaacaccaatcgactaatatcgagatcccgcaaggc
cctacgaatcaaccacgtcttctccttcgtaacctcaatgagacggacgccactttccac
ctttctggcgtggagctcgcctatgcgaacagtctgagaagagttatgatggccgatgtg
cctactatcgccatcgatcaagtcctctttatgcaaaatacaacgcctttagcagacgaa
atgattgcccaccgtttaggtctcattccccttatctcccgtaacgtctcgaagggactt
cgctacactcgagactgtgactgtgacgaaggatgttattactgtatggtaactttgaga
ttaaaggtgactttcagtgggaatgatggagagcagttcatgagggtgacaagtgatatg
ttggaagtggtcccgagtcctggtgggcccccgccccccaatccttatggacctccacct
gaactttcagaagaagatcgcatcatcatcaacaatcgtgatcctgaaatgggccagcct
attggaaagggaaatcccactgtacctccgatattgatcgcaaagatgggcaaggggcag
gagattgatgttttatgcaaggcttataagggtatcgcgaagcaccatgccaaatggtct
cccttatcaactgtagcctttgagtatgacccctataacaaacttcgtcatacaacgcat
tggttcgagactgatgaacgtgcggaatggcctctctcttcaaatgccgcgtttgaaacc
cctccaaatcccgcagaaccattcgactacaatgcggtcccgtccacattctacttctcc
gccgaatctgtcggttccatccccgtccgttccgttgtcgaacaaggtctcgaccttctg
atagagggcctcgcaaatgtcgtgttgggcgtacagaaagagattggtggcgaagaggaa
gagggggaagatggagcggccgcagatggagttgttggggatgggatgggcgtgggcatg
ggagggggtttggtagaaccgaatatacctgcggggataggtcaagatcagatggccatg
gcaggtggatacggagggtacggatctcagcagggttatggaggttcatggtag

DBGET integrated database retrieval system