Cryptococcus deneoformans B-3501A: CNBF2080
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Entry
CNBF2080 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K11373
elongator complex protein 1
Organism
cnb
Cryptococcus deneoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnb03016
]
CNBF2080
Transfer RNA biogenesis [BR:
cnb03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
CNBF2080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
TPR_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_GEMI5
Beta-prop_WDR19_1st
TPR_1
Motif
Other DBs
NCBI-GeneID:
4936760
NCBI-ProteinID:
XP_774778
LinkDB
All DBs
Position
6:650224..654692
Genome browser
AA seq
1213 aa
AA seq
DB search
MSFLVDSGIKAAAWSPDDEQLVLVTGDDMLVCMTRNFDVIHEEPLRSEDFGQDKFINVGW
GSRSTQFHGSLGKSAARQPADPARPVAHPTDHGLPVISFRGDAAFFAVSSLDPYPDGSGQ
ARRQVRIYARDASSGFQPKLSATSESLPGLEPALAWRPSGNLISTMVRYGYHGGGEGREG
RWDVAMLERNGLRHGGFELREDKGDWEDGTVRGLGWNSDSEILAVWIERKERDVLQLWSM
KNYHYYLKQELYSHDTQKPRFRGFKWHPEDPLSLYIICQDSIQHRTFTWDTFAARLPMPH
DTASVAVIDGTRLLLTPFRTQNTPPPMSSYHLALPSTPVHACLSSWEDTAAAVFANGHVM
VWKLNTRLPSPAPGSKLKRGGQVAEPVIVLEKKVDGKRVIRNLALGPRGRVAVLSLAVDA
DGPAEQSGRVNVFGGGEGEQDEEFEVESGVESILWTDQGNVLVLNGQKRLEEPIDLTLPS
QPTSVLLSGHLLFTLSPTSKLHMTALTPFAAHPTSLSLSQQPVTSFTLTSSFLIYTTTAH
FAHFAPLVTLERLANGDDGAGGSGSEMKWEERRVERGAKIVVASESEMSLVLQATRGNLE
TVYPRPMVLQVVKRDVLAQVFGAYRAAFLTCRKHRLDLNLLYDLDPEKFMANLETFVENV
HEVDYLNLFISSLKQAVYGDQARDQARDTPPTIPAAKDKVNTICDSLRILLEARGLETYV
ESILTTHVCKIPADYESGLRVLLQLQADHPEIVEDAIKYIIFLSDVNKLYDVALGMYNFQ
LVLMIAQYSQKASFLPPNGNLDPKEYLPFLRELRALGKWDQRFKIDDHLERRESALANLK
QAGPERFEDAASYLAKYELYDTAFKLYNDDQEKLTVIRDLYGDYLYDRREYTDSALSYLI
ANKPQKALKAYERAHAWRELFALAKKEGLSKQSLDEMIERVTDYLGSRGRHLEASQIFIE
YSSDVDSAVDTCCRGAEFSEAYRLTSIHDRSDLVEAMIHPGLEEAHEALIEVFEEMDGQL
DKETRRLKELNEIREKDYDAFYIVEREIDIEGVDVATNATTVASAFTRYTVAPSTMFSQT
TRMTGQTAKSKRGKKRATGRRGTVDEWEYLVMSIGRLLARVDEKSAEALILLRHLLLASS
DHVALAQSLQNTIISFRTKLSNALDEAWQDRDAVLKEVVESGGSGLEGALEKSLGEIKPQ
VGEWKGMGLLLSN
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttctcgtcgacagcggcatcaaggctgctgcctggtcgcccgacgacgagcag
ctcgtcctcgtcaccggcgacgacatgctcgtctgcatgaccaggaatttcgatgtcatc
cacgaagagccgctgcgatcagaagactttggacaggacaaattcatcaacgtcggctgg
ggatccaggtcgacccagttccacggctctctcggcaagtccgccgcccgccagcccgcc
gaccccgcccgcccagtcgcccacccgaccgaccatggtctccccgtcatctcgttccgc
ggcgacgccgccttcttcgccgtctcgtcgctcgacccctacccggacgggtccggccag
gcaaggcgccaggtcaggatatacgcccgcgacgcctcgtcaggtttccagcccaaactg
tcagccacctcggaatccctgcccggcctggaacccgccctcgcatggcgaccgagcggg
aacctcatctccaccatggtccggtacggctaccacggcggcggagaaggtcgggaaggc
aggtgggatgtggccatgctggagagaaacggattgcggcatggcggtttcgagctgaga
gaggacaagggagattgggaagacgggacggtcaggggattggggtggaattctgattca
gaaatactggccgtctggatcgagcggaaggagagggatgtcttgcaactatggtccatg
aaaaactaccactactatctcaagcaggaactctactctcacgatacgcaaaaacccagg
ttcagagggttcaaatggcacccggaagaccccctatctctctacatcatctgccaagac
tctatccagcaccgcacattcacatgggacacctttgccgcccgtctacccatgccgcac
gataccgcctccgtcgccgtcatcgacggcacccgtctcctcctcacccccttccgaacc
caaaacacacccccgcccatgtcctcctaccacctcgccctgccctccacccctgtacac
gcgtgtttatccagctgggaagacacggccgcagcggtgttcgcaaacggccacgtaatg
gtatggaaactcaacacgcggctgccttcgcctgcacctggatcgaaattgaaaagaggc
ggccaagtcgcagagccggtgattgtccttgagaaaaaagtggacggaaaaagagtcatc
cgcaatctggcgctcggtccccgcggtcgagtcgcagtcctcagtctggcggtagacgca
gacggtcccgccgagcaaagcgggcgcgtgaatgtgtttggaggaggagaaggcgaacag
gatgaagagtttgaagtggagagtggtgtcgagagcatcttgtggactgatcaaggcaat
gtcctcgtgttgaacgggcaaaagagactcgaagaaccgatcgatcttacacttccctcc
caacccacctccgtcctcctctccggccacctcttattcactctttcaccaacatccaag
ctccacatgaccgctctcaccccatttgcggcccaccccacctccctctccctctcccaa
caaccagtcacctcgttcacgctcacgtcttctttcctcatctacaccactaccgctcac
tttgcgcactttgcgcctctggtaacattggaaagactcgccaatggagatgatggcgcg
ggcggcagcggcagcgagatgaagtgggaagagcgaagagtggaaagaggcgcaaaaatc
gtcgtggccagtgagagcgaaatgagtttggtgctccaagcgactcgtggtaatctcgag
acggtttaccctagacccatggtcttgcaagtcgtcaaacgggatgttttggcgcaagtc
ttcggagcgtaccgtgcagcattcctgacgtgcaggaaacatcgactggacctcaacctc
ctgtacgaccttgaccctgaaaagttcatggccaacttggagacctttgtggaaaacgtt
cacgaggtggattacctcaaccttttcatctcttctctcaagcaagctgtttatggtgac
caagctcgcgaccaagctcgcgatacacccccgaccatccccgccgccaaagacaaggtc
aacaccatctgcgactcgctccgtatcctcctcgaagcccgcggtttggaaacgtacgtg
gagagtatcctcaccacccatgtctgcaagattccggccgattacgaatcgggattgaga
gtccttttgcaattgcaagcggaccacccggagattgtagaggatgcaatcaagtacatc
atcttcctttccgatgtgaacaagctctacgatgtagctttgggaatgtacaacttccag
ctcgtcctcatgatcgctcaatattctcaaaaggcaagtttcctcccccctaatggcaat
ctcgatccgaaagagtaccttccctttttgcgagaactccgcgctcttggtaaatgggat
caacgattcaagattgacgatcatctcgaaagacgagaaagtgcgttggccaacctcaag
caagctggtccagaaaggtttgaagatgcagcatcgtatctcgccaagtatgagctgtat
gataccgcatttaaattgtacaatgacgatcaagaaaaattgactgttatccgtgacctt
tacggagactacctgtacgaccgccgagagtatacagattctgcgctttcatacctcatc
gcgaacaagcctcaaaaagcactcaaggcgtacgagcgtgcgcatgcctggcgagagttg
tttgcgttggccaagaaggaaggtttatcaaagcagtctttggatgagatgattgagcgt
gtcacagactatctgggctcccgaggtcgacatttggaagcttcccagatattcatcgag
tattcatccgatgttgatagcgctgtcgatacttgctgccgcggcgccgaattctctgaa
gcctaccgcttgacatctatccatgaccgatcggatcttgtagaagccatgattcaccct
gggttggaagaggcacatgaagcgctcatcgaggtctttgaagagatggatggacagctg
gacaaggaaacaaggagattgaaggaattgaacgagattcgggagaaagactatgacgca
ttctatatcgtggagagggagattgatattgaaggcgtggacgttgccaccaatgctact
actgtcgcctccgcattcacacgatacaccgttgcgcctagcacaatgttttctcagacg
actcgaatgaccggtcaaacggccaagtcaaagaggggcaaaaagagggctacaggtcga
aggggtactgtggatgagtgggaatacttggtgatgagtattgggcgattgctcgcacgc
gtagatgaaaaaagcgccgaagccctcatactcttacgccaccttcttttggcctcctcg
gaccatgtcgctctcgcccagtctctccaaaacaccatcatctcgttccgaacaaagctt
tccaacgctttggatgaagcttggcaagatagagatgctgtgctgaaagaggttgtagag
agtggcggtagtggattggaaggtgcattggagaaaagcttgggagagatcaagccacag
gtgggagaatggaaaggaatgggtctgttattgagcaattga
DBGET
integrated database retrieval system