Cryptococcus neoformans var. neoformans B-3501A: CNBG1750
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Entry
CNBG1750 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03013
Nucleocytoplasmic transport
cnb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBG1750
03015 mRNA surveillance pathway
CNBG1750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBG1750
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CNBG1750
mRNA cycle factors
P-body specific factors
CNBG1750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
4937209
NCBI-ProteinID:
XP_774193
LinkDB
All DBs
Position
7:570778..572259
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AA seq
415 aa
AA seq
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MAPQLSTAAPRNKLVIRRLPPTLPEDIFWQSVSAWITDKNCLWKSFIKGKAGDSNYDSHP
VYSRAYVLMADPESLVNFHRSEFQAVVEYAPFQKAPLKTKVKVDNRQGTIDEDPDYLSYI
QSLNAPVTKPVLEVATPVAQPTTTPLLEHLRSQKSASKNKSKAAKTAQNQAQSSATAPES
ARRAAALASINAASQRRGGQTNTGPVMVAGKGREVMITPSSTPPVPDGAKQKQQGEQAQQ
GAKPEQADKEKKSRGGRKRNKGKDKQKEGVNSVPSGRQTPSAPSTSSTTTQAPLSGRPVR
SARIDNPVPNMPSQSQFVPAPKTASGSARAPQAPAGKSGPGAGNNGEPRGNESGRGRQRG
GRGRGGGGQPKTSSAGPQVKILSRNPVPPVGSGPRRGDREGAGSDAGAAFARIDM
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacagctctcgactgctgcgcctcgcaacaaactcgtcatccgccgtcttccg
cccactttgcccgaagacattttttggcaatcagtctcagcatggattactgacaagaat
tgtctctggaaaagtttcataaaaggaaaggcaggcgacagtaattacgactcccacccc
gtctattccagggcatacgtgttgatggcggatcccgaatccttggtaaacttccatcgt
tccgagttccaagctgtcgtcgagtatgctccgtttcaaaaagctcccctcaagacgaaa
gtgaaagttgacaaccgacaaggtacaattgacgaagatccagactatttgtcatacatc
caaagtcttaatgcgccagtcacaaagcctgttctggaagttgccacgccggtcgcccag
cccactacaactcccctcctcgagcatctccgctctcaaaaatcagcaagcaagaacaag
tccaaggcagccaagactgctcaaaatcaagcccaatcatccgctactgcacctgaatct
gctcgacgagcggccgctctagcttctatcaacgctgcttcgcagcgacgcggtggtcag
acaaacaccggcccagtcatggtggctgggaaaggtagagaagtgatgatcactccttct
tcgacaccccctgtgcctgatggcgctaagcaaaagcagcagggcgaacaggctcaacaa
ggcgccaaacccgagcaagcggacaaggagaaaaagtcaagaggcggaagaaagaggaat
aaaggaaaggataaacaaaaggaaggagtgaatagcgttccaagcgggcgacaaactcct
tcagccccatctacttcgtcaacgacaacccaagcgcctttaagtggtagacctgtacga
tcagcacgcatcgataatccagtccctaacatgccctcacagagccaatttgtccctgcc
ccaaaaacagcttctggttccgccagggctccacaggctccagcaggaaaatctgggcca
ggtgctggtaataacggcgaaccgagaggtaatgagtctgggcgtggaagacaacgcggt
ggtaggggacggggaggtgggggccagccgaaaacatcttctgcaggcccccaagtcaag
attttatcacgaaatccagttccgccggtcggatcgggtccccggcgtggcgatagggaa
ggggctggttctgatgctggcgctgcttttgctcgtatcgacatgtaa
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