Cryptococcus deneoformans B-3501A: CNBH0910
Help
Entry
CNBH0910 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnb03036
]
CNBH0910
Enzymes [BR:
cnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNBH0910
Chromosome and associated proteins [BR:
cnb03036
]
Eukaryotic type
Meiosis-specific proteins
Others
CNBH0910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Sec63
Helicase_C
ResIII
SNRNP200_wHTH
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
4937611
NCBI-ProteinID:
XP_774045
LinkDB
All DBs
Position
8:complement(233504..239676)
Genome browser
AA seq
1528 aa
AA seq
DB search
MDFEEDQPLWDGSCQEEEDVYFGKFGYAEGYESPYHPNNSPTPRYDIGLSSRSLNPGQNL
TGFSASQFNPSRPTPFPLISDSHSLLTDLALNRSTRQFTPENSLARDHSAILQRQQSENY
GDEIWEDEEFVEAVNESFNHEIDNAKEYDPVITAETIRSREELRNKAVFNKNGKPLVPLS
RLPIDQRKLFKFPCFNNVQSEVFDDVYQSDENLVVSAPTGSGKTTIFELAFLHNLSFRTP
DDSLKPLAVYIAPTKALCNEKAKDWQERLSQALPDVICNEITGDYGNTSTIYNSIRTADL
MVTTPEKFDSMTRRSRNLENMSQRLRLIMIDEVHILRESRGATLEVVISRLKGLGRGIRF
VALSATVPNIDDIARWLGPTRNEYGQLSRGVLVGREVISAKEKRAPAVDDMPMAKVYKFG
EEYRPVPLQRETYGIESTGNDWALANRLDKELFPILLRHAAGQPVLVFCPTRKSCQATAE
SIFQSYEEARAKGLKLPWQHPPGVRLELQDKKLTELSTCGIAVHHAGLDYGDRRAIEDGF
RDGKLHMIASTSTLAVGVNLPAHTVVIKGVMAWQGASSGFQEYSDIDIQQMVGRAGRPQY
DTSGVVVVMCERSKVRKYQSMLNSQTVLESCLHENLTESDSLRSDINSEIGQGTIRSVSS
AQEWLRNSFFHIRIQQNPKHYALSDAKDKPVEGAWEEWLDHYVEKALINLEKDGFIERAD
DDTLIPTETGKIMSSSMISYGTMCSIKAMSPGSTVQDLLEILAGSTEFQDLRIRQGESGF
LNKLRINEEIRFPLAEAVKSYADKVFLLLQVTFGNIILEDIAKKTELTSPIQTLMAIYNH
APRIVKGNETHSRCPVLTSKEAIVQFTLNREYGIAARSALELHRVVVGKAWEDLPTIFRQ
IPSIGPKSIRVLGQNGITNFDQLLDVESEKIQLWLNRGHDFARAIHEQARRMPRFHVTME
EENMDYDGTYNVLNLRVNITPKAKVIATESRGKRGGFITQYNLSTLFLNQSGGFIGYRRL
ELKKLIKNKDNSFIIAVTLSKRCDSVVAIVGVDEVAGCSTVIHYNTNLDDSVYPEDLEDD
ENVEEPPSQRTLVEPTPELEEELLPNGNVKCHHSCKDKLACQHVCCKSGVPPRKRNKAGA
RASGRSNVRTAADRIRETQYCVESPREELRPVGKAVRRIRQGSQMSRSPSPASNVQAANH
KAAIVSEMQPNTRARIVRGPLSSTVAIEPRSRSTTPIVPPRAVKNENIASGQIKEPLFLP
GSDDDYNARHHENDPSRKAIARSKAMSGSTSRYFDQPKTSGKAKNALSRKPPTMPVTSSA
SHPSILDLLPGQATIKNNSDANSHDLGPIHGNFSDDGYETVRESPEMKHSRVFPHSKPSI
DWYTEEIVQDDPEKSTEANKSHVVTNAQAPENWEFNIEEMFADISGSPSSPKQLEEEPKS
VLNINPSPSLKRPARLIIGGFGRPSIKRQRLHEDQHSSNYSPAQPFAQSDNPDILHANEN
GPTAQGPSASMPQNEMDEFEDWYMGEGG
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgaagaagatcagccactgtgggatggatcgtgtcaagaggaagaagacgtc
tactttggaaaatttggttacgcagagggatacgagtctccgtatcaccctaataattct
ccaacaccaagatacgacattggtctttcttccaggtcactcaatcctggacaaaatcta
accggcttttcagcatcccaattcaatccctcaaggcctactccattcccgctgatctca
gactctcattcgctcctcaccgatctggcccttaaccgaagtacaaggcaattcactccc
gaaaactcacttgcccgtgaccattcagctattttgcaacggcagcaaagcgaaaattat
ggagacgaaatttgggaagatgaggagtttgtggaagcagtcaatgagagctttaatcac
gagattgataatgcgaaggagtatgatcctgtaatcactgcagagaccatcagaagtcga
gaagaattgaggaacaaggcagtcttcaacaagaatggtaaacctctcgtaccattgtca
agacttcctatagaccagcgcaagttattcaaatttccctgtttcaataacgtccagagc
gaagtatttgacgatgtatatcaaagtgatgagaatctggttgtctcggcacccactggt
tccggaaaaacaacaatcttcgaactcgcgttcctccacaacttatcatttagaaccccc
gacgactcgctcaagcctttagcggtatatatcgcccccactaaggctctttgcaatgaa
aaggccaaggactggcaggagcggctaagtcaagctcttccggatgtgatatgtaacgaa
ataactggtgactatggcaatacatccacaatctataactctatcaggaccgcggatctg
atggtaactacaccagagaaattcgactctatgacgcgtcgatccagaaatttggagaat
atgtctcaacgtctgcgattaattatgattgatgaggtccacatcttgcgcgaaagccgg
ggtgccaccttggaagttgtcatatctcgtctgaaaggacttggtaggggcatacgcttt
gtagcgctcagcgcaacagtgccaaatatcgatgacatcgctcgttggctaggaccgacc
agaaatgaatatggccaactttcaagaggggttcttgtcggaagggaagtgatcagcgca
aaggaaaagagggcaccggcagtcgacgatatgcccatggccaaagtctataagttcgga
gaggaataccggcctgtacctcttcaacgtgaaacttacggcatcgagtccaccggaaat
gattgggcgctcgccaatagacttgataaagagctcttccctatacttttgaggcacgca
gctggccaacccgtcctggttttctgtcctacacgcaagtcatgtcaagcgacagcagag
tcaatatttcagtcctatgaagaagctcgggcaaagggcttaaagttgccgtggcaacac
ccaccaggcgtccgacttgaattgcaagataagaaattaactgaattgtccacctgtggc
attgctgtgcatcacgccggtttagactatggtgatcgaagagctattgaagatggtttc
cgcgacggtaagcttcatatgatcgcgtctacctctacgttggccgtgggtgtgaatcta
ccggcgcatactgtagtcatcaaaggcgtgatggcttggcagggtgcatcgtctggattc
caagaatactcagacattgacattcagcaaatggtgggaagggctggccgtccccagtat
gacacctcaggtgttgtggtggtcatgtgtgagcgctctaaagtgcggaagtatcaatcg
atgttaaattctcaaacagtcctcgaaagctgtctacatgaaaatcttaccgaatctgat
tctttgagatcagatatcaacagcgaaattggccaaggaactattaggtctgtctcatca
gcccaggaatggctcagaaattcgttcttccatattcgcatccagcaaaaccctaaacat
tatgctctgtccgatgcaaaagataagcctgttgaaggtgcttgggaagaatggctcgac
cattacgtcgagaaagcccttatcaatcttgaaaaggatggctttattgaacgagccgat
gacgatacactcatccctacagaaacgggcaagatcatgagcagcagtatgatttcatac
ggcaccatgtgctcgatcaaggcaatgtctcctggatcgaccgtacaagacctgttagag
attttggctggatccacagagttccaagacttgcgaatcaggcaaggagagagtggtttt
ttaaacaagcttcggatcaatgaagagatccgtttccccctcgcagaagctgtgaagagc
tatgccgataaagtctttcttttacttcaagtgactttcggaaatatcatccttgaggac
attgccaagaagacagaactcacatcaccaattcaaactcttatggccatctacaaccat
gcccctcgcattgtcaaaggtaatgaaacgcattctcgttgtccagtattaacatcgaag
gaagctatagtacagttcactttgaatcgtgaatacggtatagctgcgcgctcggcctta
gaactccatcgagtagttgtgggtaaagcttgggaagacttgcccaccattttccgtcag
atccctagcattggcccaaagtccattcgagtcctaggacaaaacggcatcacaaatttt
gatcagcttcttgacgtggaatcagagaagatacagttatggttgaatagagggcatgat
ttcgctcgcgcaatccatgaacaagctcgaagaatgccacgattccatgtaaccatggag
gaggaaaacatggattacgatggaacttataatgttctcaacctgcgcgtgaacataacc
cccaaggctaaggtcattgcgacagaatctagaggcaaacgtggcggctttataacgcag
tataatctctcgactttgttcttaaaccagagtggaggattcatcggctaccggagatta
gagctgaagaaactaataaagaacaaggacaatagcttcatcatagcagttacgctgagc
aagcgctgtgatagtgttgttgcgatagtcggggtcgatgaggtcgctggttgctcgaca
gtaattcactacaatacaaacttggatgactcagtatatcccgaagatttggaggatgat
gaaaatgtagaggaaccaccttcacagagaacgcttgttgagcctactccagagctggaa
gaggaattgcttcccaacggcaatgttaaatgtcatcactcatgcaaggacaagctagca
tgccagcacgtttgctgtaaaagtggggtacctccaaggaaacggaacaaggcaggtgca
agagcttcgggaagaagtaatgtcagaacggccgctgaccgtattcgggagacacaatac
tgcgtggaatcacccagagaagaattaagaccagtagggaaagccgttcgaaggatacga
caaggttctcagatgagtcgatccccgtcccctgcttcaaatgtacaagctgccaatcat
aaagcagcgattgtttcagagatgcaaccgaacacaagagcgcgtatcgtccgtggtcca
ttatcttctacagttgcaattgagcccagatcgagaagcaccacgccaatcgtaccgcct
agagcagtcaagaatgagaacattgcgagtggacagataaaagaaccattattcctgcca
ggatcagacgacgattacaacgcgaggcaccatgagaatgatccttcacggaaagctatc
gctcgctccaaagcaatgagtggttcgacatcaaggtattttgatcaacccaagacatcc
ggcaaggccaaaaatgcactttctcgcaagcctccaacaatgccagttacgtcttctgcc
tctcacccttccatcctggatttattgccaggacaagctacaatcaagaataacagcgat
gccaattctcacgatttaggacctatccacggcaacttctctgatgatggctatgaaaca
gtgcgggagagccccgagatgaaacattcaagggttttcccgcactctaaaccatctatc
gactggtatacagaagagatcgtgcaggacgatcccgaaaaatccacggaggccaataaa
tcgcacgttgtaaccaacgcgcaggcacctgaaaattgggaattcaatattgaagagatg
tttgcagacatcagcggatccccatcttctccaaaacagctagaagaggagccaaagtca
gttctcaatataaatcctagcccttcgctcaagcggccagcacgactcatcattggcggt
ttcggacgtccatcgataaaacggcaaaggctccatgaggaccagcattcaagcaattat
tcgcctgcccaacctttcgctcaatcagataatcccgatatcttacatgcaaatgagaac
gggcctacggcacaaggaccttcagcctcaatgccgcagaatgagatggatgaatttgaa
gattggtacatgggggagggcggatag
DBGET
integrated database retrieval system