Cryptococcus neoformans var. neoformans B-3501A: CNBH2420
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Entry
CNBH2420 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb04138
Autophagy - yeast
cnb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
CNBH2420
04148 Efferocytosis
CNBH2420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnb04131
]
CNBH2420
Membrane trafficking [BR:
cnb04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
CNBH2420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
Beta-prop_HPS5
Vps39_1
WD40_WDHD1_1st
WD40_CDC20-Fz
Mcl1_mid
PEP5_VPS11_N
Beta-prop_EML_2
zf-RING_Vps41
TPR_PEP5_VPS11
WD40
zf-C3H2C3
Beta-prop_WDR90_POC16_2nd
zf_RING_Vps8
WD40_Prp19
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
4937765
NCBI-ProteinID:
XP_773790
LinkDB
All DBs
Position
8:complement(687843..691633)
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AA seq
1036 aa
AA seq
DB search
MSSSSHSSLSPPSKPAFVHDTPEAGPSVQSLRSRTSSLSSTSSSVSRKGKERARVPNGDD
LDSELSETESGDENSEEEEDDDEEKEGSQSSERSGHESENKDGPSTKEKSSEDDEEQIED
DDEEDSEESSDEEEEEPALKYSRLKGRIPEILAKDSASTISVSPRSVALGTHNGMVHILS
YEGVKINSFRPHAASVTCLRMDESDDFVATSSVEGRVVIHSLSTPESYAFDYKRPMRAVA
LEPDFAKKKSRAFVCGGMAGNLILQEKGWMGYKEQILHSGEGPIWAIEWRRNLIAWANDL
GVKIYDTNTGQRIGYIDRGASAPRAELFKCTLQWKDDQTLLIGWADHIKSVRVRSRPSSQ
ASGNLPPLTVEMTAIYQVDCMISGIAPFGGSYVILAYIAPDRYENEATDDPIEQRRKAAN
RPELRIIDKGEETNADALSLANYHMYGCNDYSLVKSQKPGEEAFLVISPADVIVVRPRDE
ADHIEWLVEKERFQEALEAAEEMQKKHGSALDMKGIGLKYMRHLVSKEQFEQAAELAPKI
LEQDVAAWEKWIDIFVQHQQLPVIIPYIPTQKPRLGRRVYEMVFTHLLINDKQALLKVIA
SWPTEIYDLTTLVDAIQGELQASHDDPVLLECLGELYLINRLPAKALPYFLRIRKPYVFD
LIREHNLFTAVRDQALQLVTFDQERKKAQGKRENQRGEKTDDAEMGSVEGDKSKHGAAIQ
LLVDHVHSIPIERVVHQLETKPHYLYMYLDALLDKDPQYSLPYSDRMVELYAAYDVDRLM
PFLRTSNFYDLEKAYAVCKERDYVPEMVFLLGRMGNNKRALMLLIERLGDVERAIEFAKE
QADEDLWEDLLAYSESRPDFIRALLEHVGAEINPIRLISRIRNGMEIPGLKPALVKILQA
SNLQVSLLEGCQHILNGDCAGLMGQLQKGQTNGLKASFTSTCAVCSKPAFTNSPSLVLIY
ICRHLVHAECVLPEGVDLPVRQENASVAYLLADEGRMGGRRGAAWKARNLGARLGYAAAV
RVRVKQCPVCESKQGH
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgagcagccactcgagtttatcacctccaagcaaaccagcatttgtccacgat
acccccgaagctggcccctccgtccaatcactgcggtctcgcacttcgtccctttcctcc
acctccagctcagtctctcggaagggcaaagagcgcgccagagtacccaacggagatgat
ttggatagtgaattgagcgaaactgaaagtggggatgaaaatagtgaggaggaggaggac
gatgatgaagagaaggaggggagtcaaagctctgaaagaagcggacatgagtcggagaac
aaagatgggccgagtaccaaagaaaaatcaagtgaagatgatgaagaacaaatcgaagat
gacgatgaagaagatagtgaggaatcgagtgacgaagaggaggaggaaccagcactcaag
tacagcagattaaaaggtcggataccagagatcttagccaaagactctgcatctaccata
tcggtgtcaccaagatctgttgctctagggacacacaacggaatggttcacatcttgagt
tatgaaggcgtcaaaatcaactcgttcaggccgcatgcagcgagtgtgacatgtttgcgt
atggatgagagcgatgactttgttgcaacgtcaagtgtagaaggccgtgtggtgattcat
tctctcagcacaccggaatcttatgcttttgactacaagcgtcccatgcgtgcagttgcc
cttgaaccagattttgccaaaaagaagtctagggcattcgtttgcggtggtatggcgggc
aacttgatcctacaggagaagggatggatggggtataaagagcaaattctccattctgga
gagggacctatctgggctattgaatggagacggaacctcatcgcttgggctaatgatctt
ggagtgaagatctacgatactaacaccggccaacgaataggttacatcgatcgcggtgca
tctgcgcctcgtgccgagctctttaaatgcactcttcaatggaaagatgatcagacactt
ctaataggctgggcggatcacatcaagagtgttcgcgtccgctcccgtccttcaagtcag
gcctctggaaaccttcctcccttgactgtcgagatgacggccatctatcaagttgattgc
atgatctctggtatcgcgcctttcggaggctcatacgtcatactcgcatacatcgcgccc
gacagatatgaaaatgaggctaccgatgaccccattgaacagcgtcggaaggcggcaaac
cgaccggaattaaggattatcgataaaggggaagaaaccaatgctgacgcactgagtcta
gccaattatcacatgtatggctgcaatgactattcattggtcaagtctcagaaacctgga
gaggaagcattcttagtcatcagtcctgccgatgtcattgtggtcagaccaagagatgag
gctgaccatatcgaatggctggtggaaaaggaaagattccaagaggcgttggaagcagcc
gaggagatgcagaagaagcatggtagtgcactggacatgaagggaattgggttaaaatat
atgcgacacctcgtgagcaaagagcaattcgaacaagctgcagagcttgcaccaaaaatc
ttggaacaggatgtggcggcttgggaaaaatggatagacatcttcgtgcaacatcaacag
ctacctgtcatcattccatatatcccgacacaaaagcctaggctagggagacgtgtgtac
gagatggtgtttacacatcttttgatcaacgacaaacaggctcttctaaaggtcatcgca
tcgtggccgacggaaatctatgatctcacaacactggttgacgccatccagggagagctg
caggcttcccatgacgatccagttttattagagtgtctgggtgaattatatcttatcaac
cgccttcctgccaaagctctcccgtacttccttcgtatccgcaaaccctatgtctttgac
cttattagagaacacaatcttttcaccgcggttcgagaccaggctctgcaactggttacc
tttgatcaagaacgaaagaaagcccagggcaaaagggagaaccaaagaggcgagaagacg
gatgatgcagaaatggggagtgtagaaggtgacaagagcaaacatggagctgcgattcag
ttactcgttgatcatgtccactctatccctatcgagagagttgtacaccagcttgaaact
aagcctcattatttgtacatgtatctagacgcccttttggataaagatccacaatactct
ttgccatacagcgacagaatggttgagctctatgctgcgtatgatgtcgacagactgatg
cctttcttgcgtacaagtaacttctacgacctcgagaaggcctatgctgtatgtaaagag
cgcgattatgttccagaaatggttttcctcctcggcagaatgggtaacaataagcgagcg
ctgatgcttcttattgagcgtcttggcgatgtcgaaagggcaattgagtttgcaaaagaa
caagccgatgaggatctttgggaagacttgttggcttattcggaaagccgaccagatttc
atccgtgctcttctagagcacgttggcgcagagatcaaccccatccgactcattagtcgc
atccgcaatggcatggagatccctggactgaaacccgctttggtaaaaatcttgcaagca
tccaaccttcaggtctctttgctggaaggctgccaacatattctaaatggagactgtgcc
ggtctgatgggccagctgcaaaagggtcaaactaatggtctgaaagcgtcatttacgagc
acctgtgcggtgtgttcaaaacctgcctttacgaactcaccatcccttgttttgatttac
atctgtcgacatcttgtccatgcggaatgtgtgcttcctgaaggggtagacctaccagta
cggcaagaaaatgcttcagtcgcgtatttgctggcagatgagggccgtatgggcggccgt
agaggcgcagcgtggaaggcaagaaatctcggggccaggttgggctatgcagcggcggtg
agggtccgagtcaagcaatgtccggtgtgtgagagcaaacagggacattag
DBGET
integrated database retrieval system
