Cryptococcus deneoformans B-3501A: CNBI0490
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Entry
CNBI0490 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNBI0490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBI0490
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CNBI0490
mRNA degradation factors
5'-3' decay
Lsm complex
CNBI0490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
4938002
NCBI-ProteinID:
XP_773435
LinkDB
All DBs
Position
9:complement(<154707..>155461)
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AA seq
135 aa
AA seq
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MDALIPFTTSGSLVDLVDKKVLVILRDGRKLIGLFRSYDQFANFLLESCVERLHYKLEYA
DKDIGVLLVRGENVVALGEIDLIAEDMVPLQQVNVQEIEEKISAENKQRERDHAVKESVL
SKMGFVNEGKEGDAY
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggacgctctcatcccgttcacgacttctggttcactggttgaccttgttgacaagaaa
gtcctcgttatcttgcgagacgggaggaagttgataggcttgtttaggagttacgaccaa
tttgccaacttccttcttgaatcgtgtgtagagagattacactacaaacttgaatatgca
gacaaggatattggagtgttgttagtgcgaggagagaacgttgtggctttaggagaaatt
gatctgatagcggaagatatggtacctttacaacaagtaaatgtacaagaaatcgaggaa
aagatatccgctgagaacaaacaacgagaacgagaccacgctgtaaaagaatctgtgtta
tcaaagatgggctttgtgaacgagggcaaggagggcgatgcatactag
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