KEGG   Cryptococcus deneoformans B-3501A: CNBI0490
Entry
CNBI0490          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNBI0490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cnb03019]
    CNBI0490
Messenger RNA biogenesis [BR:cnb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CNBI0490
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CNBI0490
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 4938002
NCBI-ProteinID: XP_773435
LinkDB
Position
9:complement(<154707..>155461)
AA seq 135 aa
MDALIPFTTSGSLVDLVDKKVLVILRDGRKLIGLFRSYDQFANFLLESCVERLHYKLEYA
DKDIGVLLVRGENVVALGEIDLIAEDMVPLQQVNVQEIEEKISAENKQRERDHAVKESVL
SKMGFVNEGKEGDAY
NT seq 408 nt   +upstreamnt  +downstreamnt
atggacgctctcatcccgttcacgacttctggttcactggttgaccttgttgacaagaaa
gtcctcgttatcttgcgagacgggaggaagttgataggcttgtttaggagttacgaccaa
tttgccaacttccttcttgaatcgtgtgtagagagattacactacaaacttgaatatgca
gacaaggatattggagtgttgttagtgcgaggagagaacgttgtggctttaggagaaatt
gatctgatagcggaagatatggtacctttacaacaagtaaatgtacaagaaatcgaggaa
aagatatccgctgagaacaaacaacgagaacgagaccacgctgtaaaagaatctgtgtta
tcaaagatgggctttgtgaacgagggcaaggagggcgatgcatactag

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