Cryptococcus deneoformans B-3501A: CNBI1560
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Entry
CNBI1560 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03082
ATP-dependent chromatin remodeling
cnb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CNBI1560
03083 Polycomb repressive complex
CNBI1560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnb03036
]
CNBI1560
Enzymes [BR:
cnb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CNBI1560
Chromosome and associated proteins [BR:
cnb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CNBI1560
HDAC complexes
Sin3A-HDAC complex
CNBI1560
BRAF-HDAC complex
CNBI1560
REST complex
CNBI1560
SHIP complex
CNBI1560
MiDAC complex
CNBI1560
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CNBI1560
Heterochromatin formation proteins
Other heterochromatin formation proteins
CNBI1560
Chromatin remodeling factors
NuRD complex
CNBI1560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
CobT
Motif
Other DBs
NCBI-GeneID:
4938115
NCBI-ProteinID:
XP_773542
LinkDB
All DBs
Position
9
Genome browser
AA seq
555 aa
AA seq
DB search
MTNLHFGVCSSTNRLHQKNPTNVLLCLVCIISSAQSYISPDYQLMIPSTSSTNHSAFRVS
YLWSPALQRLSDDLPSNVGRSSMVHDLIKSFDLLDFEELKERFSKSDKPEDEDGKSEDDD
DNEADRNEVNNGDKQGADGEPQRRKPGSPTESPPHAQNKKATVVFPQPSLGTKACLLKYH
DRSYIERLLMAHIDRDPNDPTHLPSSPSSSASSPRPAKIARTDPYNLSHDNPVFPTLASY
ISHVTAATSTACRLLATDKADWAVCWDGGRHHAKRKEAGGFCYVNDLVLGGLLLSREGRI
PLPLKEGEDPKRQRTRAPRILYLDMDLHYSDGVSAAFHSPTVYPYPLKEGITPPKPPNVL
TLSVHHSSPIFFPPPTPLSLLPSPDTESPFSLSIPLSAYPSRQTYAKVFNQCIQPIREAW
DPDYIILQLGTDGLPGDRVGQYGNWSVDGEGGIKWVVERVKEWGKKVCVTGGGGYRHDNA
ARAWAEVMGVLLDRDFVEDMPIPHHDHFEQYAPSFTLQVPDSHMRDENKPEDLEKAAEVF
NVLAERIKIIVDANS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacctccactttggcgtctgctcttccactaaccgtctccatcaaaagaatcca
acgaatgtactgctttgtttggtctgcatcatctcttcagcgcaatcctatatttctcca
gactatcaactaatgataccatctacaagttcaacaaatcactctgcatttagagtgtca
tacttatggtcgcctgctcttcaacgtctatccgacgacttgccttcgaatgtcggacga
tcaagtatggtgcatgatttgatcaagtcattcgacttacttgactttgaagagctgaaa
gagaggttctcgaaaagcgataagccggaagatgaggatggaaagagtgaggatgatgac
gataatgaagcggacaggaacgaagttaacaatggagataaacaaggggctgatggagag
ccccaaagaagaaaaccgggcagcccgactgagtctccaccccacgcccaaaataagaaa
gccacagtcgtatttcctcaaccaagtctaggtaccaaggcatgtctcctaaaataccat
gatcgctcatacatagagcgccttctaatggctcacatcgacagagatcctaatgatcct
actcatctcccttcttcaccttcgtcatccgcttcttctccccggcctgccaagattgct
cgcacagatccttacaatctctcgcacgacaatcctgtatttccaactttagcgtcgtac
atctcccacgtaacagccgctacatccacggcgtgccgtctgcttgccactgacaaagct
gactgggcggtatgttgggatggtggccggcatcatgcgaaaagaaaagaggctggagga
ttttgttatgtgaatgatctcgtcctgggtggcttgttgctctcccgcgaagggcgaata
ccattaccgttgaaagaaggggaagatccgaagaggcagaggacaagggcaccaaggata
ctctaccttgatatggacctccactactctgatggagtttcagcagccttccactccccc
acagtatatccctaccccttgaaagaaggcataacccccccgaaaccaccaaacgtcctg
accctttccgtccaccactcatctcccatcttcttccctcctcctacacccctctctctc
ctaccctccccagatactgaatctccgttctctctctccatcccactctcagcttaccct
tcccgccaaacatatgcgaaagttttcaaccaatgtatccagccgatccgcgaagcttgg
gatccagactacatcattctccagctcggcactgatggtcttcctggagatagagtgggc
cagtacggaaactggtctgttgatggggaaggagggatcaagtgggttgtggagcgagtg
aaagagtgggggaagaaagtttgtgtgacaggtggaggagggtatagacatgataatgct
gctagagcgtgggccgaggtcatgggcgtcttgctggatagagactttgtcgaggacatg
cctattccccaccatgatcattttgagcagtacgctccgtcttttactctacaagtgcca
gacagccatatgagggacgaaaacaagccagaagatctggaaaaggctgccgaagtgttc
aacgtcctcgctgagagaattaaaatcattgtagacgccaattcatag
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integrated database retrieval system
