Cryptococcus deneoformans B-3501A: CNBJ0820
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Entry
CNBJ0820 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNBJ0820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBJ0820
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CNBJ0820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
4938421
NCBI-ProteinID:
XP_773087
LinkDB
All DBs
Position
10:<323559..>324633
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AA seq
268 aa
AA seq
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MSTFDRRRIPAPEISIPPVYEPLPNDAQAGPSTRTDRTDQESRPIFLKTGLISQAHGSGY
IEAGGVKIACSVYGPRPKPPPYSPQGTLNLEVKFAPFASDPRRAPLRDTEPLPLSNLLTQ
LLLPTLHLHLLPKSSIDVYLLVLESDTLTNVLSAGLTVASAAVADAGIEMAGLGVGGVVA
SVGGDEKQGRRRVVIDPSLEEEKESDVKVMVGTMPALGKVTNIWLTGEAEVDDACNMIEQ
VIEASKETHSVLAEALVEGAGERGIAAA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttttgaccgccgtcgtatcccagcacccgaaatatccatccctcctgtctat
gaacctcttcccaacgatgctcaagcaggtccgtccacccggacagacagaactgaccag
gagtcaagaccgatattcttaaagacgggattgatcagtcaggcgcatggtagtggatat
atcgaagctgggggtgtcaagattgcttgttccgtgtacggccctagacccaaacctcct
ccatactctcctcaaggtaccctcaaccttgaagtaaaatttgccccatttgcctcagac
cctcgccgtgcgcctttacgcgataccgaaccacttcccttatccaacctcctaacccag
ctcctactccctacactccacctccacctcctccccaaatcatccatcgacgtctacctc
cttgtcctggaatctgataccctcaccaacgttctctctgcagggctgactgtcgcttcg
gcagcggtggctgatgctgggattgagatggccggtttgggtgtgggaggagtagtagcc
agcgtcggaggggatgagaagcaaggcaggagaagggtggtgattgatccgagtctggaa
gaggagaaggaaagtgatgttaaagttatggttgggacgatgccagcgttgggcaaggtg
acaaacatatggctgactggagaggccgaagtggatgatgcttgtaatatgattgaacag
gtcatcgaggcttctaaagaaacacacagcgtcctcgccgaggctttggtcgaaggagcc
ggagaacgaggtatagcagctgcatag
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