Cryptococcus deneoformans B-3501A: CNBJ3110
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Entry
CNBJ3110 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03440
Homologous recombination
cnb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CNBJ3110
03460 Fanconi anemia pathway
CNBJ3110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnb03032
]
CNBJ3110
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBJ3110
Enzymes [BR:
cnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CNBJ3110
DNA replication proteins [BR:
cnb03032
]
Eukaryotic type
DNA Topoisomerases
CNBJ3110
DNA repair and recombination proteins [BR:
cnb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
CNBJ3110
FA (Fanconi anemia) pathway
CNBJ3110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Motif
Other DBs
NCBI-GeneID:
4938657
NCBI-ProteinID:
XP_773035
LinkDB
All DBs
Position
10:979980..984306
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AA seq
1059 aa
AA seq
DB search
MRVLCVAEKPSIAKSITEILSGGRWDTRNGRHQYIRNYDFLYNLAPPLGNGRGANFTVTA
VLGHLTSSDFDDDHRKWGSCDPFALFDAPVITFVDQKLKTVESNLQIEARNADILMIWTD
CDREGEHIGSEVVAACKKVNRNILVKRARFSAIIPAQIHQACRQANDLDMRQADAVATRI
SLDLKVGSAFTRLTTMTLQVRVPDLAEQLISYGPCQFPTLGFVVEQYTRVQAFVPETFWY
IFVALEREHEDGEPSTVEFRWKRNHLFDLDLAAVLYEQCTVNPQTRVLKVESKPATKWKP
LPLTTVELQQSGSRLLHMTPKRILDLAEKLYQKGIVSYPRTETDQYDPKFDFNSLIQKQT
LDNQWGAYAQKLLDGAFQKPRNGRKNDKAHPPIHPTAHAGNLEGDERRVFELITRRFLAS
CSTNAEGQNTTVEISIADEIFSTTGLVVLRRNYLEVYPYDKWATHALPNFEEGEVFIPDV
IDLKEGTTSRPSLLTEADLVGLMDKNGIGTDATIAEHIAKIIERGYVTEKQEARIKYLVP
STLGIGLVEGFNAIGFDRSLSKPHLRRETEHRMQLICDGVRGKREILQTTIEEYKEVFVK
ARREFQTVIDCVENYLHGAGEAQEALRAAARGGRGGRGTRGARGARGGRGTGGRGRGGGG
VVAPRGGRDDDNDDDDDDDDDQGPPRGGVRERARGAATTRGRGTSTARGRAGAAGAGTAA
GRRAGSPTFGADDGGGDTKMCNCGREAVSRVVAKADSAHKGRSFWTCPQPQGEQCGFFEW
GTDGDMARSAGPSKSRTASAQPPPSKRQKTTNRNDPPPSKDGVPSCKCGLDAAFATVIKE
GPNKGRQFWACPNNPKARCGFFQWEDDPNLGSGGSNGGDTYNGGGGRSGTSGGLCFVLER
YTLNAKPDKIATQSATNAEKRVIGQMHVRTTAMAKVAAHLQAGQSQIQRRFLKEKAVTVE
VMFLAHVINVVNKAIGPLIVPIIQAEGEVALVLGPPVMGLVDIVSNATNQAIGPATVRMM
KVEDRHIGVRVAVEVGGEGEEEEEVNDSTTLMTVVQHHP
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcctgtgcgtcgctgagaagccaagtatagcgaagagtatcaccgagatactc
tccggaggacggtgggatactaggaacggaagacaccaatatatacgcaattacgatttc
ttatacaaccttgctccgccgcttgggaatggaagaggtgccaattttaccgtcacagca
gtcttgggacatttgacttcaagtgattttgatgatgatcatcggaaatgggggtcttgt
gatccgtttgcgctgttcgatgcaccagtcatcactttcgtcgaccaaaaattgaaaaca
gtagaatcaaacctccaaattgaagcccgtaacgccgacatactcatgatttggactgat
tgtgatagagagggagaacatatcggatctgaagtcgtagcggcgtgtaagaaagtaaat
aggaatatccttgtcaaaagagcgaggtttagtgccattatccctgcgcagatccaccaa
gcatgtagacaggcgaacgacttggatatgaggcaggcagatgcggtggccacgaggata
agcttggatctcaaggttggatcggcgttcacaaggcttacaacgatgactttgcaagta
cgagtgcccgatctagcagagcaactcatcagttacggtccatgccaattcccaactctc
ggctttgtcgtcgaacaatacacccgcgtccaagcctttgttcctgaaacgttctggtac
atcttcgtcgccctcgagcgagagcatgaagatggtgaacccagcactgtcgagtttagg
tggaagaggaaccatctgttcgatttagatctggcggcggtgttgtacgaacagtgtaca
gtcaatccgcagacgagggttttgaaggtcgaatcaaagcccgcgaccaagtggaagcca
ttaccgttgacgacagttgagcttcaacaatctggttcgaggttacttcatatgactcct
aaacgaattctcgatcttgccgaaaaactctatcaaaaaggtattgttagttatcctcgt
accgaaaccgatcagtacgatcccaaatttgacttcaactctctcatccaaaagcaaacg
cttgataaccaatggggagcttacgctcaaaagctactagacggtgcctttcagaaaccc
cgaaatggccgtaaaaacgataaagcccatccccctatccaccctaccgcacacgcgggc
aaccttgaaggcgacgaacgccgcgtattcgaactcatcacccgtcgttttctcgcttct
tgctcgaccaacgccgaaggccaaaataccactgtcgaaatctccatcgccgatgagatc
ttctccactacagggcttgtcgtcctgaggaggaattatttggaggtgtacccgtatgac
aagtgggcgacgcatgcgttaccgaattttgaggaaggggaggtttttataccggatgta
attgatttgaaggagggaacgacgagtcgaccaagtttgttgactgaggctgatctggtt
gggttgatggataagaatggcatcggtaccgatgcaaccatcgctgagcatattgccaaa
atcattgaacgcgggtatgttacagaaaaacaagaagctcgaataaaatacctcgtgcca
tctactctgggtatcggtctggtcgaagggttcaatgctatcggttttgaccgttctttg
agcaaaccacatttacgacgagagactgagcatcgaatgcaattgatatgtgatggtgta
cgagggaaaagagagattctccagactacgattgaagaatacaaggaagttttcgtcaag
gcccgtcgagagttccagaccgttatcgattgcgtggaaaactaccttcacggagctggc
gaagcccaagaagctcttcgagcagcagcacggggtggtcgaggcggacgaggaactaga
ggagcgagaggtgcaagaggggggagaggaactggaggaagaggcagaggtggtggagga
gttgtcgctcccagaggcggtcgagatgatgacaatgacgacgacgacgatgatgatgat
gaccaaggtccgccgagaggtggtgtaagagagagagcgagaggtgcggcgacgacgaga
gggaggggaacaagtactgccagaggacgagcgggagctgctggagctgggacggctgct
ggtagaagggcaggatcgcctacttttggcgcggatgatggcggtggcgatacgaaaatg
tgcaactgcggtagagaagctgtctctcgcgttgttgccaaggcggattcggcgcataag
ggaagatcgttttggacatgtcctcagcctcaaggagaacaatgcggcttcttcgaatgg
gggacggatggagatatggcacgctcggctggccctagtaaatcacgaacagccagtgct
caaccgccgccatccaaaagacaaaaaaccacgaatcggaacgatccccctccttcgaaa
gatggcgtaccttcgtgtaaatgtggccttgatgcggctttcgccacagtaatcaaagaa
ggtccaaacaaaggtcgacagttctgggcttgtccgaacaacccgaaagcccgttgtggg
ttcttccaatgggaagatgatcctaatctcggcagtggtggttctaatggaggtgatact
tacaacggaggaggaggaaggagtggaacctcaggaggtttgtgcttcgtgcttgaaagg
tacaccctaaatgccaaacctgacaaaattgccacacagagtgctacaaatgcggagaag
cgggtcattgggcaaatgcatgtccgaacgacggcgatggcaaaggtggcggctcatctt
caagcagggcaaagtcaaattcaaaggcgctttctaaaggaaaaagcggtgacagtggaa
gtgatgtttttggcgcatgttataaatgtggtgaacaaggccattgggccactaattgtc
ccaataatacaagcggagggggaggtggctttggtgttggggccaccggtgatgggatta
gtggacattgtttcaaatgcaaccaaccaggccattgggccagcaactgtccgaatgatg
aaagtggaggatcgtcatatcggggttcgagtagcagtagaggtcgggggcgagggagag
gaagaggaagaggtaaacgatagcacgactcttatgactgttgtacaacaccatccataa
DBGET
integrated database retrieval system
