Cryptococcus deneoformans B-3501A: CNBK0960
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Entry
CNBK0960 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CNBK0960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBK0960
DNA repair and recombination proteins [BR:
cnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CNBK0960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
4938792
NCBI-ProteinID:
XP_772722
LinkDB
All DBs
Position
11:complement(281531..285795)
Genome browser
AA seq
1205 aa
AA seq
DB search
MPSAKQATLAAFFGAPKPGPRPSQPRSSQLKSSPASTLRTPSTSVAGSSPVQAKSSRPAP
GSSIKRSSPLKQPEPSSEITAIEDEDDELTPPPKSDVSDATTVGESSSGKKQDEDEEMDD
DEPPIVTGRRAKRKVVYVDPDSDDDSEGEVKPKASNGRRPRKSLKEDSEDEYMFDEADDA
AMAAALDDFEANKLSPSKSPSPPRKITKAKATPSASSKKPTTTPIRPGPKPIANKGSESS
SFLTAAERKKIQAKEDKRESEQCFDFLVNIRDKEGNRPDDPDYDKRSILIPKKSWAEFTP
FEKQFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVGVPEQSLE
FWIAKFLGAGHKVGIVDQAETAIGMEMRTKAGQKTGGREIVRRELARVFTNGTIVDSGYL
NSDDPNHLVSIKESSGSPEGISSFGICIADASTGEFSISFFEDDVCRTRLETMFRQIRPK
ELIHAKGNLSVTTTRLLRNILPSSTAWQSFRDGKEFYTAEDTLSLLPSIFSNEQGQITIP
EAITSLQDNALAMESLGGMLFYLKSLNLDKDLFSQRNFNIYDPIKEGKNLILDGKTLGHM
EVLVNNEGGIEGTLAELLQRCVSPSGKRLFKVWLRSPLRDADAINARLDAVEDLMNHPRF
SGDFTQLCKGLPDLERLISRIHAGSVKQSDFLQVVESFSKLQKGIDNLIDMSESLESTGV
KALLRSAPDLSGMIQHIRGMYTIEQNEKTIAILPNPGADEECDAADAEVERIEEELNEIL
EEVKKTLKCKEAVFWHSAQGGKEIFQIQVPASVKAPARWTKASGTKSHNRYYTPETIPVI
RQIQEARETQAAAKKNFFKHLMDEFSKDRETWLITVRVIAELDCLVSLAKASSDMDEPKC
RPTFVSSSSAFIDFRDLRHPSMCLRSDFISNDVQLGGDQPRQVLLTGPNMAGKSTLLRMT
AAGVIMAQLGCYVPASEARLSPVDKIQTRMGAYDNMFASASTFKVELDECSRILREAGPK
SLVILDELGRGTSTYDGMAIAGAVLHHIATHSLPLGFFATHYGSLTDDFAYHPNIRRMHM
QTHVDDEQKQVVFLYKLIPGVAESSHGTHVARMAGVPLDVVLRAESVSQQFFSAFNDKLV
NRRQSKMPIVAQADFAWLMRVVKGLEGAVAGSQDKKGILGGHEATLADQLDIVERCAGGY
EIAEA
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgctaagcaggccaccctcgctgccttcttcggcgcacccaagccaggccca
agaccgtcccagccaaggtcttcacagctcaagtcgtccccagcctccaccctccgcacc
ccttcaacctctgtcgctggcagctcgcctgtccaagcaaagtcttcccggccggccccc
ggcagcagcatcaagaggagtagtccactgaagcaacccgagccgtcatcagaaatcact
gcgatcgaggatgaagatgatgagctcaccccgccgcccaagagtgacgtatctgacgct
accacggtcggagagagctcaagtggcaagaaacaggatgaggatgaggagatggacgat
gatgagccgcctatcgtgactggccgacgggcaaagcgaaaggttgtctatgttgatccc
gacagcgacgatgactctgaaggcgaggttaagcctaaagcaagtaatggtagaaggcca
cgaaaaagtctaaaggaggattctgaggacgagtacatgtttgacgaagcggacgatgct
gctatggctgctgctctggacgatttcgaggccaacaaactttctccttccaaatctcct
tctcctcccaggaaaataaccaaggccaaagctacgccctctgcgtcgtctaaaaagccc
accaccacaccaatccgtcctggacccaagcccattgccaataaaggctctgaatccagc
tcattcctcaccgccgctgagcgcaagaagattcaagccaaagaggacaagcgcgaatct
gaacaatgcttcgactttcttgtcaacattcgagacaaggaaggaaaccgcccagatgac
cctgattatgacaagcgctcaattctcatcccgaagaagagctgggccgagtttacgccg
tttgagaagcagttttgggagatcaagcaaaatcattacgacactgtcctattcttccaa
aaaggcaaattctacgagttatacgaggatgacgccttgatcggtcaccaagagtttgat
ctcaaattgactgatagggtcaagatgaagatggtcggtgtccccgagcaatctcttgaa
ttttggatcgccaagttcctcggtgcaggtcacaaagttggaatcgtcgaccaagctgag
actgctattgggatggagatgcgaacaaaggctggtcaaaagactggaggaagagagatt
gtccgacgagagttggctagagtgttcactaacggaaccattgtcgacagtggttacttg
aactctgatgatcccaatcatttggtctctatcaaggaatcatctggtagcccggaaggc
atctcttcctttggtatctgtatcgccgatgcctcgactggtgaattctcaatctctttc
tttgaggatgatgtctgccgaactcggctcgaaacgatgttcaggcagattcgccccaag
gagctcattcatgccaagggcaacttgtctgtcacgaccacccgactccttcgaaatatc
ctcccctcttccaccgcctggcaatcgtttagggacggcaaggaattttacaccgctgaa
gatacactcagtctcctcccctccatcttttccaacgaacaaggtcaaattaccatccca
gaagccatcacctcgcttcaagataacgcccttgccatggaatctctcggcggaatgctt
ttctacctcaaatcgctcaaccttgacaaggacttgttctctcaacgcaactttaacatt
tacgatcccatcaaggagggtaaaaacctcatcttggacggcaagaccctcggtcacatg
gaagtgttggtaaacaatgaaggtggtatcgaaggcactctggccgaacttcttcagcgg
tgtgtttctccatcaggcaagaggttgttcaaagtttggttgaggtcaccgttgagagat
gcggatgctatcaacgccaggttggacgcggttgaggaccttatgaaccatccaaggttc
tctggtgatttcacccagctttgtaaaggacttcccgatcttgaacgtctaatctctcgt
attcacgccggctctgtcaagcaatctgactttcttcaagtcgtcgagtcattttcaaaa
ctccaaaaaggtattgacaacttgatcgacatgtctgaaagcttggagtctacgggagtc
aaggcgctgctgaggagtgcgccagacttgagtgggatgattcaacatattcgagggatg
tacactattgagcagaacgagaagacgattgctatccttcccaatccgggcgcggatgag
gaatgcgatgccgcggacgccgaggttgaacgtattgaggaagagttgaacgagattctt
gaagaagttaagaagactctaaagtgcaaggaagcagtattctggcatagtgctcaaggg
gggaaggagatcttccaaatccaagtcccggcaagcgtcaaggcccctgccaggtggaca
aaggctagtggtaccaagagtcacaacaggtattacacccccgagactatcccagtcatc
agacagattcaagaagctcgtgagacccaagcagctgccaagaaaaactttttcaagcac
ctcatggatgagtttagcaaggatcgtgagacatggcttatcaccgttcgagtgatcgcc
gagttggactgcctcgtctcccttgccaaagcgtcctccgatatggacgaacccaagtgt
cggcctacctttgtttcctcttcctctgcgtttatcgactttcgtgacctccgacaccca
tccatgtgcctccgctccgattttatttcaaacgacgttcagctcggtggagatcagcct
agacaggtgctgttaacaggtccgaatatggcgggtaaaagtacgctgttgagaatgact
gctgcaggagttatcatggcacagttgggatgttatgtgcccgctagtgaagcgagattg
agcccggtggataagattcagactagaatgggtgcctatgacaatatgtttgcgagtgcg
tcgacttttaaagttgagctggatgaatgttctcgcatcttgcgtgaagccggaccaaag
tctcttgtcatcctggacgagctgggtcggggaacctcaacctacgatggtatggccatt
gccggtgcagtgttacatcatattgctactcactccctccccttgggattcttcgctacc
cactatggatccctcaccgacgatttcgcgtaccatccgaatattcgtaggatgcacatg
caaacgcacgttgatgacgagcaaaagcaagttgtctttttgtacaagctcatccccggt
gtggcggagtcatcgcacggtacacacgttgcaaggatggctggtgtcccactagatgtc
gtccttcgtgccgaatcagtatcccaacagttcttttctgcattcaacgacaagctcgtc
aaccgtcgtcagtcaaagatgcctattgttgcccaagcagattttgcatggttgatgagg
gtcgtcaagggtttggaaggtgcggtagctggtagtcaggataagaagggcatactggga
gggcatgaggcgaccttggctgatcagctggatattgtcgagcgatgtgcggggggctat
gagattgctgaggcatag
DBGET
integrated database retrieval system
