Cryptococcus deneoformans B-3501A: CNBL0530
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Entry
CNBL0530 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNBL0530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBL0530
Enzymes [BR:
cnb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CNBL0530
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CNBL0530
DNA repair and recombination proteins [BR:
cnb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CNBL0530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
4939097
NCBI-ProteinID:
XP_772574
LinkDB
All DBs
Position
12:complement(161820..163849)
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AA seq
475 aa
AA seq
DB search
MPELPEVERARKLIEDSCKGYKIASVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERKG
KTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQE
GSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKKG
TVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAVPLTAISV
NADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKSKGKKVVDGEGGEDVEPEDKEFLELPDG
SPATIKFIEVGGRTTALVEELQKMPEGVEIKPKISKGGKRAGAKRKKVAKEEESDEESEL
SDQSDLEEQKPKRPLTARQKAAAEKKGINSNLASQTKTEDNKPSAAKRRAIGARTGGSKN
HPDSEVKKEKGSTECRKSKKQVEAVGEKLAKIKPQKGRKKAASTPESSELSDLVE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctccctgaggttgaacgagctcggaaacttattgaagactcctgcaagggg
tacaagatcgcttcagtcgatgctcaagaagacagtatcatctttaccggtggaacagac
cataacgagtttgccaaagagatcgcaggaaggtctataacaggatgtgagcggaaagga
aaaacgttctggatgaccttgtcgggtgaaggacgatacccggtgatgcatttcggcatg
acaggtatgatacagctcaaaggtcaagaaccaacttggtatcggagaagacccaaagaa
agtgcggatgtctggcctcccagattctataagttcgtattaaagcttgaacctcaagaa
ggctccatcgccgacgaacctcgagaacttgctttcatagatgggcgtcggcttggtcgt
cttcgtttggtatctgatcctgtatcttctcatcctcccgtctcggagttaggtttcgac
cctatactcaatcatccaactttggaagagtttacaaagctgctggtgaacaagaaaggt
actgtgaaaggcgtcatcatggaccaagcattcagtgcgggtgttggcaattgggttgca
gacgaggtactttaccaggcccgtatccacccttcttgccccattcccgcattatccgaa
caaaacattagagatctccaccaccaactccgtgctgtgcctctcaccgcaatatctgtc
aatgctgattcgaaactttttccttccgactggctcttccgctggaggtggagtaaaggt
acaactcagaaaaagcagatggagaaggacaaaaagagtaaagggaagaaggtcgtggac
ggtgaggggggtgaggacgtggagccggaggataaagagtttttggagcttcccgatgga
tcaccagccacgatcaaatttattgaagtcggtggacgaacgactgcactagtcgaagaa
ctgcaaaagatgccggaaggagtcgagatcaagccgaaaatcagtaaaggcggcaaaagg
gccggagcgaagaggaagaaggtcgctaaggaggaagaatcggatgaagagagtgaacta
tccgaccagagtgatttagaagagcagaaacccaaaagacctctgacggcaagacaaaaa
gcagccgcagagaaaaaggggatcaacagtaatttagcctcgcagacgaaaactgaagat
aataaaccttctgctgcaaaacgacgagccattggagcaaggactggggggtccaaaaat
catccggattcggaggtgaagaaggaaaaagggagtacagaatgtcgtaaatccaagaag
caagtggaggcagttggcgaaaaacttgcaaagatcaagcctcaaaagggtagaaagaag
gcagcttcaactccagagtcttcagaactgtccgatcttgtcgaatag
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