Cryptococcus deneoformans B-3501A: CNBL1770 Help Entry CNBL1770          CDS       T01040                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism cnb  Cryptococcus deneoformans B-3501A Brite KEGG Orthology (KO) [BR:cnb00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cnb03021]     CNBL1770 Enzymes [BR:cnb01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      CNBL1770     5.6.2.5  RNA 5'-3' helicase      CNBL1770 Transcription machinery [BR:cnb03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      CNBL1770 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel Viral_helicase1 AAA_30 AAA_19 UvrD-helicase nSTAND3 T2SSE Motif Other DBs NCBI-GeneID:  4939226 NCBI-ProteinID:  XP_772309 LinkDB All DBs Position 12:559897..567090 Genome browser AA seq 2245 aa AA seqDB search MSFDFSFVNRKPPKFTVLYCSSFDRLPPLFSSGINHTWWQDMSSDNPRPEDVEALLAARR RVQEKPNTDALLPVYLYLLPQSNEASSGSSPLEDHWYCSRSKSTLHIEAATYLIFLFAFQ RQGTSKTWVDKLEVVLESCENCARSFGVARRRLESRYLSEWPAHVRKNFFAAVDKWQSTF ILNHSDKASDRGYGKPSSTEPALYSLSQPIVQLLLGEPSLLSDPGVNSLYQDAFQSTLPA PTSLTALGMTPIHARLLSSSEPAQNRWSAAQLPALARRPIRFLEWCNLGIGSEIQDLYND GVLDGEKRWQNVAAILNNKVLDQETVEKGLLGGQLETDSRGRKGRGVMSVLSGLLSSDIP YLESVISCLATLLHISPTRYIWSFDTSPDLPHTLISELRTNPAFHELLETRYPSPLDSEA DGHNAHGNGSNKSKGRRKPDTNPLDWLGDYLLSVADTEKGLVTQVGEEKGSGMAFAEALA VATNMVFQELQHGRLSNELRATAASAGFEAILRVYQTLIAEDVSVNTAISSTLDLHSSFI TTVAFRSKNHPLPAWCEARSSARALLTIIFQADARSTIHSLLTMAAVAHEERKRQQKKRR TKSDVAVGPAKKVDHLPLASVRKDLWSMAYDALSPNDAAGAAILLKSLAPFSHIELLDRQ ASWYHHGLEEAVKKEDWVAAIRAINIAIKATRESFPRAIESLASQADPSGVRSLWKEQGV AKAATILLLSPDDEIHTPIISIIQQSFDDVDDRGDCFRALLQHYPDTAVDGLNDFLRTFI ETARITPESCSLAKWLVRCFHDVLEVLCRPSGVLGPLLQSDDFLTSFADGRSMRKRLEEL WHLMTTSLALIFKRTLDWAPHFENEVMVDWMRDALIFGRQMTDHIRAFEAAVLGSSARGS ETMSESSARQSLVGKKMTKQLELVLSDLILWLRLTDIETLFQTHQLIKTILGRISKSTTD VSKNPTLEKTLLDIDKFCRKGSRSFTSRLSDDLLSELSDLLEPFNLVDDSEVQFVKEVKP KSSSDVGTSRESTSNISTPSTSKAPVRNAFTEMMKASGGKLASSSKTSTSTAKSKLPTPN DVVDVDDFDDDFLSNISASDLDLIEKRAILKESARQAPPKPSIQSRLSTSARPHMPSSKL HVDLTYKVPPKPAPSFQSKVMQDIRREHYASIHERKRLEAGQVAPKLPTASALGSGLGAY TGPPKPRVVEPVDSGSSASDSSDDERAAMKGLLSKQKSPAKPVRPVVEKRSIKVLGDPMA EIHRRNEDRRAKAHATKMRLKPDLSPLYRYILSWDPDHQGPSPPYGTKFAAELSDMRVVP TTFDSPRQYERIMLPLFLQELWSQCANDQVQVGPVIPVEVASRQYEDDFVEIDLMVIGAG DFYCNDSDLVTLRQPSNPKGIFAKIMGFKKHPKGSMIRARIMSAMDQKELCGKSKWQLRK HVSLSTSIREFAALKGLPWYESSLLSDILAGRSAVMPKLSTERIEDTMKCLSLNEPQAKA VLGALEVKGFALIQGPPGTGKTKTISGLVGKWMSERRVPISVDGQPPVKPKLLVCAPSNA AIDEVCKRLILGVPNPDGGQYNPNIVRVGIDASVNIAVKDVSLDSLVEALISNSSGRNVG GEYGRIQAELDDVKQQIKDKQEAIKLAQDHDEKRKVLEDEYHALITRRTQLGQASSKAKD AARDATRHLDGARRAARDQILKDADIICATLSGAGHDTLAAHTFETVIIDEAAQAIEMSC LIPLKYGCKRCIMVGDPNQLPPTTFSTNAEKLQYNKSLFVRMTKRDASHVQLLSIQYRMH PFISELPSKVFYHGQLKDGPSMAKKTAAIWHQRNIFGPYRFFNVEGTEMKTGTSTKNPAE ALAAVELYRRLSADFGTRVNLAMRVGVISMYREQLWELKRKFTEAFGSAILELVEFNTVD GFQGQEKDIIILSCVRSGPNLSHIGFLKDTRRMNVALTRAKSSLFIFGNGPTLERSDERW KIIVQDARDRGFFVNVGCFPCSKALLIMSQLFQYDSTTFNTAFLEPPPSVKKKASATSKS KASPGASKSTTMPDGLLPPKDLAADISTPSKVKREASVELAKEKKKKRKMSDGSSRAEES NSNVAVATSKPTSRLSSGSTLPSVKHAEDSPQPSSSKPPLPRIPRPPQSSNAPKMTRPPP PPPEDVLFIKKKKKVRFKPIYPKQYILISCICSDSTSNNFRSTTHAILHPSIRICLQSPS TIPSYFLAVSIEDVPEVVRQISTDV NT seq 6738 nt NT seq  +upstreamnt  +downstreamnt atgagctttgatttcagcttcgtcaaccgcaagcctccaaaattcaccgttctttactgc tccagtttcgaccgcctgccaccgcttttttcatctggcatcaaccatacatggtggcag gatatgtcctctgataatccacgtccggaggacgtcgaagccctcctcgctgcaaggcgc agagttcaggagaaaccaaatacggacgcccttcttccggtctacttgtacttgttaccc caatcgaatgaggcgtcgtctggctccagccctttggaggaccactggtactgcagcagg tccaagtccactctccacattgaggccgccacatatcttatattcctctttgccttccag cgtcagggcacttcaaagacttgggttgacaaactagaggtcgttctcgaatcatgcgag aactgtgctaggagctttggggtcgcgaggagacgtttagaatctagatacctctctgaa tggccagcacatgttcggaagaatttctttgccgctgttgataagtggcaaagcactttc attctcaaccattccgataaagccagtgacagagggtatggaaagccaagttccactgaa cctgcgctctactctctcagtcagcctatagttcagttgttattgggtgaaccgtcgctg ttatctgatcctggcgtcaacagcttatatcaagacgcctttcaatcgacacttcctgcg ccaacatcacttaccgctcttggaatgacccctatacatgctcggctactttcctcctcg gagcctgcgcaaaatcgttggtctgcagcccaactgccggctcttgcccgtcggccaatt cggttcttagaatggtgcaatttaggaatcgggagcgagatccaagatttgtataatgat ggggtgctcgatggggaaaaacggtggcaaaatgttgcagcaattctaaataataaggtt ctcgaccaagaaactgttgaaaagggccttttgggtggccagctggaaactgactcgcga gggagaaaggggagaggagtgatgtctgtgctgagtggccttttgagtagtgacattcct tatctggaatccgtcatttcctgccttgctactcttctgcacatttcaccgacgcgatac atatggtcattcgatacttcccccgatcttccgcatacccttatatcagagcttcgaaca aatccggcattccacgaacttctcgaaacccgttatccctcaccgctcgattcagaagct gacggccataatgctcatggtaatggcagcaacaagagcaaagggcgacggaagccggat acaaacccattggattggttaggggactatctgttgtctgtagcagacacagagaaagga ttggtcactcaagttggtgaagagaaaggatctggaatggcatttgccgaggctcttgca gtagccaccaatatggtcttccaagagctccagcacggtaggctttcaaacgaattacgt gctacagcggcttccgctggatttgaggcaatccttcgagtttatcagacactgattgca gaagacgtgtccgtgaataccgccatctcctccacactagaccttcactcctcgtttatc acaaccgtcgctttccgctcgaagaaccatccccttcctgcatggtgtgaagcccgtagt tctgctcgtgctctcctcaccatcattttccaagcagacgctcgatctacaattcatagt ttattaacaatggcggcggtcgcccacgaagaaagaaaacgtcaacagaagaagagaaga accaagtccgatgttgctgttggtcctgccaaaaaggttgaccatctaccacttgcatcc gtgcgaaaagatttgtggtccatggcttacgatgcgctgtcacccaacgatgctgcgggt gctgctatcctgctcaaatctctcgcacccttctcgcatattgaattacttgacaggcaa gcttcgtggtatcaccatggtctagaagaagcagtaaaaaaggaagactgggttgcggca ataagagcaatcaatattgccatcaaagctacacgtgaatctttccctcgcgctatcgaa tctttggccagtcaagcagatccttccggtgtcagatcattatggaaggagcaaggagta gccaaagctgcgaccatccttctcctgtctcccgacgatgaaatccatacgcctatcatc agtatcattcagcaatcttttgatgacgtcgacgaccgaggggactgtttccgtgctctc ctccagcactatcctgatacagctgtagatgggctcaatgactttttgcgtactttcatt gaaactgcaaggatcaccccagaatcatgttctttagcgaaatggcttgttcgttgcttt cacgatgtgcttgaagtcctctgccgaccatcaggggtattaggaccgcttctccaatca gacgatttccttacttcctttgcagacggtagaagcatgcgaaagagattggaagagctt tggcatctgatgacgacgtctcttgcgctcatcttcaaacgtacccttgattgggcgcct catttcgagaacgaggtaatggtagactggatgcgggacgcgcttatctttggccgacaa atgactgaccatattagagcttttgaggcagcagttttgggatcgagtgcaagaggtagt gagaccatgtcagagtcttcggcaagacaaagtctagtggggaaaaagatgacgaagcaa ttagaattggtgttgtcggatcttatcttatggctcagactgaccgatattgaaacattg tttcagacacatcaactaatcaaaaccatcctgggaaggatcagcaagagcacgacagac gtttccaaaaaccccacccttgagaagaccttgcttgatattgataaattctgtcgcaaa ggctctcgaagttttacaagtcggctctctgatgacttgctttccgagctttctgatctt ctcgaaccgtttaatctggtcgatgattccgaagtgcagtttgtcaaagaagtcaagccg aagtcgtcatcagatgtcggtacctcgcgcgagtctacttcgaatatcagcacgccctcg acgtctaaagctccagttcgcaatgcgttcactgagatgatgaaagcgtccggtggtaaa ctggcatctagcagcaaaacatcaacgtcgactgcgaaatcaaaactacctacgcccaat gacgttgtagacgtcgatgactttgacgacgatttcctcagcaatatttcagcatccgat cttgacctcatagagaaacgggctatcctgaaagaatccgctcgtcaggcgcctccgaaa ccctcgattcaatcgagactttccacctctgccagacctcatatgccctcaagcaaactg catgtcgacctgacgtacaaggtgccccccaaacccgctccttctttccagtcaaaggtg atgcaggacatccgcagagaacattatgcttccatacatgaacggaaacgattagaagca gggcaagtcgcaccaaagttacctacggcgtctgctttaggtagtggactcggggcttat actggtcctcctaagcccagagtggttgaacctgtagacagtggctcgagtgcatctgat tcatcagatgacgagagagccgcgatgaagggtttactctctaagcaaaagtcaccagcg aaaccagttcggccggttgttgagaagagatccatcaaggtgctaggtgaccctatggct gaaatccatcgacgaaatgaagaccgaagagctaaggcccatgctaccaagatgaggctg aagccagacctcagccctctttaccgttacattctctcatgggatcctgatcaccaaggg ccttcacctccctatggaacgaaatttgcagcagagctatcagatatgcgcgtagttccg acaacatttgatagtccaagacagtacgagcgcatcatgcttccattgtttttgcaggag ctttggtcgcagtgcgcaaatgaccaagtacaagtgggacctgtcataccagtagaggtc gcatcaaggcagtacgaagatgatttcgtagaaatcgatctcatggttattggggcggga gatttctactgtaatgactctgaccttgtcacactccggcaacccagcaatcccaaaggc atctttgcaaaaatcatgggattcaagaaacatccgaaaggctcgatgattagagcacgt atcatgtctgccatggaccaaaaagaactttgcgggaagtccaagtggcaattgcgcaag cacgtctctctaagcacttccattcgagagttcgctgccttgaaaggtctaccatggtat gaatccagtcttttgtcagatattttggcaggacgaagcgctgtcatgccgaaattatcg actgagagaattgaggatacgatgaagtgtttgagcctgaacgaaccgcaggcgaaggcc gttcttggggctttggaagtcaaagggttcgcacttatccaaggccctccaggtacgggt aaaacaaaaactataagtggtctggtgggcaaatggatgtctgaacggagggtaccgatc tcagtcgatgggcaaccccccgtcaaacccaagttgctggtatgcgcccccagcaatgcc gctattgatgaagtctgcaaacgactgatcctcggggtgcccaaccctgacggtggtcaa tataatccgaatattgttagggtgggtattgacgcttcggtcaatatcgccgtgaaggat gtgtcattagacagccttgtcgaagcattgatcagcaatagttcaggaagaaacgttgga ggggaatatgggaggattcaagcggagctggatgatgtcaagcagcagatcaaggacaag caggaggcgattaagctggctcaagatcatgacgaaaagcggaaggtcctggaagacgaa tatcacgccctgattactcgccgtacacagcttggtcaagcatcctccaaagcaaaggat gctgccagagacgcaactcgccatctcgacggtgctcgacgtgcggctagagatcagatt ctgaaggatgctgatatcatctgtgctactctctccggtgcaggccatgatacattggcc gcccataccttcgagacagtaatcattgacgaagctgctcaagccatagaaatgagttgc ctgatccccttgaaatacgggtgtaagcggtgtatcatggttggagatcccaatcaatta cccccaactacattcagtaccaacgctgaaaagcttcagtacaataagagtctgttcgtt cgcatgacaaaacgcgacgcctctcatgttcagctactaagcatccaataccgaatgcat ccgttcatctcggaacttccctcgaaggtgttctatcacggtcaactcaaggacgggccc agtatggcgaagaagacggcggctatctggcatcagcgaaacatctttggtccatatcga tttttcaatgtcgaaggcacggaaatgaaaacgggcacatccaccaagaatcctgcggag gctcttgctgcagtcgaactatatcgtcgtttgagcgccgatttcgggacgagggtgaat ctcgcaatgagggttggagtgatctcaatgtacagggaacagctatgggagttgaaacga aagttcactgaggcctttggttccgcaattttggaactcgttgaatttaacactgtcgac ggtttccaaggccaagagaaagacatcatcatcttgtcttgtgttcggtccgggccaaat ctgagccatattggtttcctgaaagacaccaggcgaatgaatgtcgcactcactcgtgcc aagagttcgttatttatctttggaaatggacctactttggagcgaagcgatgaacgatgg aagattatcgtccaggacgcaagagacagaggtttcttcgtcaatgtgggttgtttcccg tgctccaaggctttgctaatcatgtcgcaattgttccagtatgattctactacattcaac acagcattcttggagcctccgccttcagtcaagaaaaaggcatctgccacctccaaatcc aaggcttccccaggagcatccaagtctacgaccatgcctgacggcttgctacctccgaaa gacctggctgctgacatatcgaccccttccaaggtcaagcgagaggctagcgttgagctg gctaaggagaagaagaagaagcgaaagatgtccgatggctcatcacgagctgaggaatcg aattctaatgtagctgttgccacgagcaaacctacttctcgattatcctctggatctacc ctgccctctgtaaaacatgccgaagatagcccacagccttcctcctccaaaccgccgcta cccaggataccgcgccctccacagtcgtctaacgccccaaaaatgacacgaccccctccg ccgccgcccgaggatgtgctcttcatcaaaaaaaagaaaaaggtacgttttaagcctata taccccaagcaatacatattaattagttgtatatgcagcgactcaacaagtaataatttt agaagcactacacacgctattcttcatccatccattcgcatttgtttgcaatctccatcc acaataccatcatattttctggcagtaagtatcgaagacgtaccagaagtcgttcgtcaa attagtactgatgtgtga

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