Cryptococcus deneoformans B-3501A: CNBL2730
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Entry
CNBL2730 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnb03009
]
CNBL2730
Enzymes [BR:
cnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNBL2730
Ribosome biogenesis [BR:
cnb03009
]
Eukaryotic type
Pre-60S particles
Helicases
CNBL2730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
4939322
NCBI-ProteinID:
XP_772407
UniProt:
P0CR09
LinkDB
All DBs
Position
12:819795..822287
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AA seq
748 aa
AA seq
DB search
MDAPVPAAPAFGGSWAKLNPPLSPWILDVINSMGFKNMTPVQAGTIPRAVKNQDCVVEAV
TGSGKTLAFTIPVLERLSRREEPYKKGEIAAIVVAPTRELATQIHAVFHHFLSSLIPPES
EEETGDVEAHAPPFASSSRSPSPQTPDKPLFPLPMLVTSGTPTPYETFQSTHPSILIGTP
GRLAAFLLNPRGLAIVRVSELDVLVLDEADRLLSSPDHRRDVERIMRHLPKQRRTHLFSA
TMTDAVEEMIGLGLRNPVRIVVNLKDKRKDGEEPKERRTPMALQNTYLVCRHAEKTLQLI
RLLLCESTKHERSKFIVYFSTCAAVDYFYRILSRLPSLSKFHLTSFHGELPPKIRETALS
TFTSHPSSHLSPAVLLCTDVAARGVDFLDIDVVIQYDAPTDPKTFSHRAGRTARAGRRGK
AVVLLGKGREEDYVGTFQSANAELMKRKRQKAQRSILDFLNIRKIPLTKQPYINAYLEEV
DTPQALDPEATTLLHSIRQIILTDRELSDKAAKSFVSAFRAYSKHEASFIFRTLDFDFNS
QAISFGLLRLPAMPEIKDWKKKKEAERQRLEKIKSEGGEVEEKEIIEWEDAGVNWDTFAY
ASRQREAARLATLAQRADNQSSNDAARAEARAKRKIKAEMREAWSEQKERKVRKEERKEK
KDAKKKYEWELEQANGEGDRQSDLANIAKAQAERKKRREREEESWDEEIGKEYKSLKREI
KEEKSVKESSKGGAGGGGIGGGMFDDLE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcccgtaccagcagcaccagcattcggcggatcatgggcaaagctcaatccc
cctctttctccatggatcttggatgtcatcaactccatgggtttcaagaatatgactcct
gttcaagcaggtactattccgagagcggtaaagaatcaggactgcgtagtggaggctgtt
actggctctggtaaaactttggcgttcacgatccccgtcttggaacggttgtcaaggcga
gaagaaccgtataagaagggcgaaattgccgccattgttgttgcacctacacgggaattg
gccactcaaatacatgccgtcttccatcacttcctgtcttctctcatccctccggaaagt
gaagaggagactggcgatgttgaagctcatgccccaccttttgcctcatcatcacgttca
ccatctcctcaaacccctgataaacctctgttccctctccccatgcttgtaacctcggga
actccgactccctatgagacttttcagtccacccatccatcgattctcatcggtacccca
ggacgtctcgccgcatttctcctcaaccctcgtggcctggctatagttcgagtatcagaa
ttggatgttcttgtcctcgacgaagctgacaggctgttgtcaagtcctgatcacaggaga
gatgttgagaggattatgcgtcatctacccaagcagcgccgaacccatttgttttcggct
accatgaccgatgctgtggaggagatgatagggttgggccttcgtaatccggtcaggatc
gttgtcaatctgaaggataagaggaaagatggggaagaacccaaagaacgcaggactcct
atggctctccaaaatacataccttgtctgtcggcacgccgaaaaaactctgcagcttatc
cgtctcctcctctgcgaatccacaaagcacgaaagatccaaatttatcgtctacttctcc
acttgtgctgctgtcgactacttttatcgcattctctcccgcctcccatcgctctcaaaa
ttccatctgacgtctttccacggtgaactgccgccgaagattcgagagaccgcgctttca
acattcacatcgcatccctcatcccatttatccccggcagtccttctatgtacggacgta
gcggcaagaggcgtggatttcctggatatagatgttgtaattcagtatgatgcgcctacg
gaccccaaaacgtttagtcatcgagctggaaggacggccagagctggaaggcgaggaaag
gcagttgttctgttaggtaaaggtcgtgaagaggattatgtcggtacgttccagtccgca
aatgcagaattgatgaaaagaaaaaggcaaaaagctcaaaggtccattttagatttcctg
aacattcgtaaaatccccttgaccaagcaaccatatatcaacgcttatctagaagaagtt
gacactccccaagccctcgaccctgaagccacgactcttcttcactcaatccgtcaaatc
atcctcaccgaccgtgagctctctgacaaagctgcaaagtcattcgtctccgcattcagg
gcatactcgaaacatgaagcttcgttcatcttccggactttggactttgatttcaactct
caagcgattagttttgggttactgagattaccagccatgccggagatcaaagattggaaa
aagaagaaggaggcagagagacagagactggagaaaatcaagagcgagggtggggaagta
gaggaaaaggaaatcattgagtgggaggatgctggtgtaaactgggatactttcgcctac
gcatcaagacaacgcgaagccgctcgtcttgccaccctcgcgcaaagagctgacaaccaa
tcatccaatgatgcggctagagccgaagcccgagccaagcgaaagataaaggcagaaatg
cgagaagcatggtccgaacaaaaagaacgaaaagtgagaaaggaagaaaggaaggagaag
aaggatgcaaagaaaaagtatgaatgggagttggagcaggctaatggtgagggggatcga
cagagtgatttggcgaatatcgccaaagcgcaagcagagaggaagaagagaagagaaagg
gaagaagagagctgggatgaagagattggaaaggagtataagagtctaaagcgagagatc
aaggaggaaaagtctgtcaaggagtcgagtaagggaggagcgggtggaggaggtataggt
ggtggtatgtttgatgatctcgagtaa
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