KEGG   Cryptococcus deneoformans B-3501A: CNBL2750
Entry
CNBL2750          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K14403  cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CNBL2750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnb03021]
    CNBL2750
   03019 Messenger RNA biogenesis [BR:cnb03019]
    CNBL2750
Transcription machinery [BR:cnb03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     CNBL2750
Messenger RNA biogenesis [BR:cnb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CNBL2750
    U7-dependent histone pre-mRNA processing factors
     CNBL2750
SSDB
Motif
Pfam: CPSF73-100_C Beta-Casp Lactamase_B_6 Lactamase_B RMMBL Lactamase_B_2 Lactamase_B_3 Beta_lactamase3
Other DBs
NCBI-GeneID: 4939324
NCBI-ProteinID: XP_772409
UniProt: P0CM89
LinkDB
Position
12:825706..828731
AA seq 773 aa
MIPRRHHFKPAPQPTVQVLQPPDEDAPSLTITMLGAGQEVGRSCCVIEHRGKKIVCDAGL
HPAQPGIGALPFIDELDWSTVDAMLITHFHVDHAAALPYIMEKTNFKDGNGKVYMTHATK
AIYGLTMMDTVRLNDQNPDTSGRLYDEADVQSSWQSTIAVDYHQDIVIAGGLRFTPYHAG
HVLGASMFLIEIAGLKILYTGDYSREEDRHLVMAEIPPVKPDVMICESTFGVHTLPDRKE
KEEQFTTLVANIVRRGGRCLMPIPSFGNGQELALLLDEYWNDHPELQNIPVYFASSLFQR
GMRVYKTYVHTMNANIRSRFARRDNPFDFRFVKWLKDPQKLRENKGPCVIMSSPQFMSFG
LSRDLLEEWAPDSKNGVIVTGYSIEGTMARTLLSEPDHIESLKGGNVPRRLTVKEISFGA
HVDYAQNSKFIQEIGAQHVVLVHGEASQMGRLRAALRDTYAAKGQEINIHTPKNCEPLTL
TFRQERMVKAIGSLAATRPEHGTSVKGLLVSKDFSYTLLSPADLHDFTGLSTSTIIQKQG
VAISVDWAVVRWYLEGMYGEVEEGVEEEGKAAFIIMNGVQVVQISPTAVELRWKSSSSND
MIADSALALLLGIDGSPATAKLTASPNKHACNHSNSHSHTDLYPHTYPGDKSAKDVASNP
EFERLRMFLEAHFGHVEGPNLRPPLPPGADGDGNDDKDKDGDDWLTMDVKLDNQTARIDL
ISMRVESESAELQKRVETVLEMALTTVKSLSQTFLGGGLDVDMVKVEPNESDS
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgattccaagacgacaccacttcaagccggctccccaaccaacagtacaagttctccaa
cctccggacgaagatgccccctcgctcacaatcactatgctcggcgcaggccaggaagtg
ggcaggtcctgttgtgtcatagagcacagaggaaagaagattgtatgcgatgccggcctg
catccagcacagcctggtataggagctctaccattcatcgatgaacttgattggtcgact
gtggatgcgatgttgatcactcattttcatgtcgatcatgcagccgctttgccgtatatc
atggagaagaccaatttcaaagacggtaacggcaaagtgtacatgacgcacgctacaaaa
gctatctatggattgaccatgatggacactgtgcgattgaacgatcaaaatccagacact
tccggtcgcctatacgacgaagccgacgtccaatcatcctggcaatccaccatagcagtc
gactatcatcaagatattgttatcgctggtggtctacgtttcaccccctaccatgccggc
catgtccttggagcgtccatgttcctcatcgagattgctgggttgaagatcctgtataca
ggagactattcaagggaggaggaccgacatctggtgatggcggagattccacccgtgaaa
cctgatgtgatgatttgcgagagcacgtttggcgtgcatacattaccagacaggaaggag
aaggaggaacaattcacaacgttggtcgccaacattgtccgaagaggtggccgatgcctc
atgcccatcccctccttcggaaacggccaagaactcgcccttctcctcgacgaatactgg
aacgaccaccccgaacttcaaaacatccctgtctactttgcatcctctcttttccaacgc
ggcatgcgtgtctacaaaacctacgtccacactatgaatgccaatatccgatcacggttc
gccaggagagataacccctttgactttaggtttgtcaagtggttgaaagatccgcagaag
cttagagagaataagggtccttgtgtgatcatgtcttcacctcagtttatgagtttcgga
ctcagtcgtgatctgttggaagagtgggcgccggattctaagaacggggtgattgtcact
gggtactccatcgaaggtactatggccaggactctcttgagcgaaccggaccacatcgaa
tccctcaaaggaggcaacgtcccccgccgcttaacagttaaagaaatctctttcggcgct
cacgtcgattatgctcaaaattcaaaattcatccaagaaatcggtgctcagcacgttgtc
ctcgtgcatggagaggcttcgcagatgggaagattgagagcggcgttgagagatacatat
gcagccaaggggcaagagattaatatccatacgccaaaaaattgtgaacctctgactctt
acttttagacaagagcggatggtcaaagctattggctccttagcagctactcgccctgaa
cacggtacctccgtcaaaggtcttctcgtttccaaagatttctcttacactctcctttcc
ccggccgatttacatgatttcactggcctctcaacgagcacgatcatccaaaaacaggga
gtggcgataagtgtagattgggcggtggtgaggtggtatctggaggggatgtatggggaa
gtggaggaaggtgttgaggaagaggggaaagctgcttttattataatgaacggagttcaa
gtggtgcagatatctccaaccgccgtagaactacgatggaagtcaagttcaagtaacgat
atgattgccgattcagctttggctttgttgttgggtatagatgggagccctgctacagct
aagctcaccgcatcaccaaacaaacacgcttgcaaccattccaattcccattcccatacc
gacctgtatccccacacctacccgggcgacaagtccgctaaagacgtagcttccaacccc
gaatttgagagattacgcatgttcctcgaagcgcatttcgggcatgtagagggaccgaat
ttgagaccacctcttcctccgggagcggatggggatggaaatgatgataaggacaaagat
ggggacgattggttgactatggatgtgaagcttgacaatcagacagcgcggatagatcta
atttccatgcgtgtggagtctgaatcagctgagcttcagaaacgggtggaaacagtgttg
gagatggcgttgacgactgtcaagtctctgtcacaaacgtttttgggaggggggctggac
gttgatatggtgaaggtagagcctaacgagagcgatagttga

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