Cryptococcus deneoformans B-3501A: CNBL2750
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Entry
CNBL2750 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNBL2750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnb03021
]
CNBL2750
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBL2750
Transcription machinery [BR:
cnb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CNBL2750
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CNBL2750
U7-dependent histone pre-mRNA processing factors
CNBL2750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
4939324
NCBI-ProteinID:
XP_772409
UniProt:
P0CM89
LinkDB
All DBs
Position
12:825706..828731
Genome browser
AA seq
773 aa
AA seq
DB search
MIPRRHHFKPAPQPTVQVLQPPDEDAPSLTITMLGAGQEVGRSCCVIEHRGKKIVCDAGL
HPAQPGIGALPFIDELDWSTVDAMLITHFHVDHAAALPYIMEKTNFKDGNGKVYMTHATK
AIYGLTMMDTVRLNDQNPDTSGRLYDEADVQSSWQSTIAVDYHQDIVIAGGLRFTPYHAG
HVLGASMFLIEIAGLKILYTGDYSREEDRHLVMAEIPPVKPDVMICESTFGVHTLPDRKE
KEEQFTTLVANIVRRGGRCLMPIPSFGNGQELALLLDEYWNDHPELQNIPVYFASSLFQR
GMRVYKTYVHTMNANIRSRFARRDNPFDFRFVKWLKDPQKLRENKGPCVIMSSPQFMSFG
LSRDLLEEWAPDSKNGVIVTGYSIEGTMARTLLSEPDHIESLKGGNVPRRLTVKEISFGA
HVDYAQNSKFIQEIGAQHVVLVHGEASQMGRLRAALRDTYAAKGQEINIHTPKNCEPLTL
TFRQERMVKAIGSLAATRPEHGTSVKGLLVSKDFSYTLLSPADLHDFTGLSTSTIIQKQG
VAISVDWAVVRWYLEGMYGEVEEGVEEEGKAAFIIMNGVQVVQISPTAVELRWKSSSSND
MIADSALALLLGIDGSPATAKLTASPNKHACNHSNSHSHTDLYPHTYPGDKSAKDVASNP
EFERLRMFLEAHFGHVEGPNLRPPLPPGADGDGNDDKDKDGDDWLTMDVKLDNQTARIDL
ISMRVESESAELQKRVETVLEMALTTVKSLSQTFLGGGLDVDMVKVEPNESDS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgattccaagacgacaccacttcaagccggctccccaaccaacagtacaagttctccaa
cctccggacgaagatgccccctcgctcacaatcactatgctcggcgcaggccaggaagtg
ggcaggtcctgttgtgtcatagagcacagaggaaagaagattgtatgcgatgccggcctg
catccagcacagcctggtataggagctctaccattcatcgatgaacttgattggtcgact
gtggatgcgatgttgatcactcattttcatgtcgatcatgcagccgctttgccgtatatc
atggagaagaccaatttcaaagacggtaacggcaaagtgtacatgacgcacgctacaaaa
gctatctatggattgaccatgatggacactgtgcgattgaacgatcaaaatccagacact
tccggtcgcctatacgacgaagccgacgtccaatcatcctggcaatccaccatagcagtc
gactatcatcaagatattgttatcgctggtggtctacgtttcaccccctaccatgccggc
catgtccttggagcgtccatgttcctcatcgagattgctgggttgaagatcctgtataca
ggagactattcaagggaggaggaccgacatctggtgatggcggagattccacccgtgaaa
cctgatgtgatgatttgcgagagcacgtttggcgtgcatacattaccagacaggaaggag
aaggaggaacaattcacaacgttggtcgccaacattgtccgaagaggtggccgatgcctc
atgcccatcccctccttcggaaacggccaagaactcgcccttctcctcgacgaatactgg
aacgaccaccccgaacttcaaaacatccctgtctactttgcatcctctcttttccaacgc
ggcatgcgtgtctacaaaacctacgtccacactatgaatgccaatatccgatcacggttc
gccaggagagataacccctttgactttaggtttgtcaagtggttgaaagatccgcagaag
cttagagagaataagggtccttgtgtgatcatgtcttcacctcagtttatgagtttcgga
ctcagtcgtgatctgttggaagagtgggcgccggattctaagaacggggtgattgtcact
gggtactccatcgaaggtactatggccaggactctcttgagcgaaccggaccacatcgaa
tccctcaaaggaggcaacgtcccccgccgcttaacagttaaagaaatctctttcggcgct
cacgtcgattatgctcaaaattcaaaattcatccaagaaatcggtgctcagcacgttgtc
ctcgtgcatggagaggcttcgcagatgggaagattgagagcggcgttgagagatacatat
gcagccaaggggcaagagattaatatccatacgccaaaaaattgtgaacctctgactctt
acttttagacaagagcggatggtcaaagctattggctccttagcagctactcgccctgaa
cacggtacctccgtcaaaggtcttctcgtttccaaagatttctcttacactctcctttcc
ccggccgatttacatgatttcactggcctctcaacgagcacgatcatccaaaaacaggga
gtggcgataagtgtagattgggcggtggtgaggtggtatctggaggggatgtatggggaa
gtggaggaaggtgttgaggaagaggggaaagctgcttttattataatgaacggagttcaa
gtggtgcagatatctccaaccgccgtagaactacgatggaagtcaagttcaagtaacgat
atgattgccgattcagctttggctttgttgttgggtatagatgggagccctgctacagct
aagctcaccgcatcaccaaacaaacacgcttgcaaccattccaattcccattcccatacc
gacctgtatccccacacctacccgggcgacaagtccgctaaagacgtagcttccaacccc
gaatttgagagattacgcatgttcctcgaagcgcatttcgggcatgtagagggaccgaat
ttgagaccacctcttcctccgggagcggatggggatggaaatgatgataaggacaaagat
ggggacgattggttgactatggatgtgaagcttgacaatcagacagcgcggatagatcta
atttccatgcgtgtggagtctgaatcagctgagcttcagaaacgggtggaaacagtgttg
gagatggcgttgacgactgtcaagtctctgtcacaaacgtttttgggaggggggctggac
gttgatatggtgaaggtagagcctaacgagagcgatagttga
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