Cryptococcus deneoformans B-3501A: CNBM1160
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Entry
CNBM1160 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K03231
elongation factor 1-alpha
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBM1160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBM1160
03016 Transfer RNA biogenesis [BR:
cnb03016
]
CNBM1160
03012 Translation factors [BR:
cnb03012
]
CNBM1160
04131 Membrane trafficking [BR:
cnb04131
]
CNBM1160
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnb04147
]
CNBM1160
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
CNBM1160
Transfer RNA biogenesis [BR:
cnb03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CNBM1160
Translation factors [BR:
cnb03012
]
Eukaryotic type
Elongation factors
CNBM1160
Membrane trafficking [BR:
cnb04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
CNBM1160
Exosome [BR:
cnb04147
]
Exosomal proteins
Proteins found in most exosomes
CNBM1160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
FlpD
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
4939476
NCBI-ProteinID:
XP_772197
UniProt:
P0CN31
LinkDB
All DBs
Position
13:complement(413922..415574)
Genome browser
AA seq
459 aa
AA seq
DB search
MGKDKLHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQELGKSSFKYAWVL
DKLKAERERGITIDIALWKFETPRYQVTVIDAPGHRDFIKNMITGTSQADCAILIIATGI
GEFEAGISKDGQTREHALLAFTLGVRQLIVACNKMDTCKWSEDRFNEIVKETNGFIKKVG
YNPKAVPFVPISGWHGDNMLEETTNMPWYKGWTKETKSGVSKGKTLLEAIDAIEPPTRPT
DKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVKFAPTNVTTEVKSVEMHHEQIPEG
LPGDNVGFNVKNVSIKDIRRGNVCGDSKNDPPMEAASFNAQVIVLNHPGQIGAGYTPVLD
CHTAHIACKFAELIEKIDRRTGKVMEAAPKFVKSGDAAIVKLVAQKPLCVETYADYPPLG
RFAVRDMRQTVAVGVIKSVDKTEKGGKVTKAAEKAAKKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggacaagctgcacgtcaacgtcgttgttatcggtcacgtcgactccggtaag
tcgaccaccaccggtcacttgatctacaagtgcggtggtatcgacaagcgaaccattgag
aagttcgagaaggaggctcaagagctcggaaagtcttctttcaagtacgcttgggttctt
gacaagcttaaggccgagcgagagcgaggtatcaccatcgacattgctctttggaagttc
gagacccccaggtaccaggtcaccgtcattgacgcccccggtcaccgagacttcatcaag
aacatgatcaccggtacctcccaggctgactgtgccatcctcatcattgccaccggtatc
ggtgagttcgaggccggtatctccaaggacggtcagacccgagagcacgccctcctcgcc
ttcaccctcggtgtcaggcagctcattgttgcttgcaacaagatggacacctgcaagtgg
tccgaggaccgattcaacgaaatcgtcaaggagaccaacggtttcatcaagaaggttggt
tacaaccccaaggctgtccccttcgtccccatctctggttggcacggtgacaacatgttg
gaggagaccaccaacatgccctggtacaagggatggaccaaggagaccaagtctggtgtt
tccaagggtaagaccctcctcgaggccatcgacgccatcgagccccctacccgacccacc
gacaagcccctccgtctccctctccaggacgtctacaagatcggtggtatcggcacagtc
cctgtcggccgagtcgagaccggtgtcatcaaggccggtatggtcgtcaagttcgccccc
accaacgtcaccactgaagtcaagtccgttgagatgcaccacgagcagatccccgagggt
cttcccggagacaacgttggtttcaacgtcaagaacgtttccatcaaggacatccgacga
ggtaacgtctgtggtgactccaagaacgacccccctatggaggctgcttctttcaacgcc
caggttatcgtccttaaccaccctggtcagatcggtgccggttacacccccgttctcgac
tgtcacactgcccacattgcctgcaagtttgctgagttgatcgagaagattgaccgacga
accggtaaggtcatggaggccgcccccaagttcgtcaagtctggtgacgccgccattgtc
aagcttgttgcccagaagcccctctgtgttgagacctacgccgactacccccctcttggt
cgattcgccgtccgagacatgcgacagaccgttgccgttggtgttatcaagagcgtggac
aagaccgagaagggtggcaaggtcaccaaggctgctgagaaggctgccaagaagaagtaa
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