KEGG   Cryptococcus deneoformans B-3501A: CNBN0610
Entry
CNBN0610          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03030  DNA replication
cnb03410  Base excision repair
cnb03420  Nucleotide excision repair
cnb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CNBN0610
   03410 Base excision repair
    CNBN0610
   03420 Nucleotide excision repair
    CNBN0610
   03430 Mismatch repair
    CNBN0610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cnb03032]
    CNBN0610
   03036 Chromosome and associated proteins [BR:cnb03036]
    CNBN0610
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBN0610
DNA replication proteins [BR:cnb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CNBN0610
  DNA Replication Termination Factors
   ELG1-RFC complex
    CNBN0610
Chromosome and associated proteins [BR:cnb03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CNBN0610
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CNBN0610
  Check point factors
   HRAD17(Rad24)-RFC complex
    CNBN0610
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 DUF815 AAA_16 AAA_11 AAA_30 AAA_22 AAA_assoc_2 RCF1-5-like_lid RuvB_N AAA_5 AAA_3 AAA_24 AAA_19 AAA_18 DEAD ATPase_2 AAA_28 ResIII nSTAND3 bpMoxR Mg_chelatase AAA_33 AAA_7 AAA_25 Viral_helicase1 MCM RNA_helicase TIP49 HVO_0513_N
Other DBs
NCBI-GeneID: 4939670
NCBI-ProteinID: XP_771880
LinkDB
Position
14:204828..206648
AA seq 373 aa
MAEPMDIDTPTSGPASGAQPRNAMAALMANAKGKGKEIASPAADGKAVDDKEGLPWVEKY
RPVSLDDVVSHKDITSTIEKFIEAGRLPHLLLYGPPGTGKTSTVLALARRLYGPAYRKHI
LELNASDDRGIDVVREQIKNFAMTKVLFSKGFKLVILDEADMMTQAAQSALRRVIEQHTK
NVRFCILCNYVNKITPAIQSRCTRFRFSPLPEKEIQVKVDEVVQKEGVNLTDDGRDALLK
LSRGDMRRALNVLQACHAAYDIVDETAVYNCTGNPHPRDIERVVQSMMADEFGTAYSLIT
SLKIEKGLALQDLIAGAYEFLDTVELPKQSRIYLLDHLGSTEHRLSLGGSEKMQLTALLG
AFKVAVELSQRKI
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggcagaaccaatggacatagacacgcctacttccggcccagcttccggcgcccaacct
cgaaacgcgatggcggcgctcatggcgaacgcgaagggaaaaggcaaggagattgcctcc
ccagctgcggatggaaaggccgtggatgacaaagagggtcttccttgggtggagaagtac
agacctgtttcgcttgacgacgttgtctcacacaaggatattaccagtaccatcgaaaag
tttatcgaagccggacgattaccgcatctcttgttatacggacccccaggtactggtaaa
acatcgaccgtcctcgcccttgcccgtcggctatatggacctgcgtacaggaaacatatc
ctcgagttgaacgcttcagatgatcgagggattgatgtggtgcgagagcagattaagaat
ttcgcaatgaccaaggtgctattctcaaaaggtttcaagctggtcattttagatgaagcg
gatatgatgacacaagcagctcaatctgcacttcgtcgagtgatcgaacagcacactaag
aatgtgcgattctgtatcctctgcaactatgtcaacaaaatcacccctgctatccaatct
cgatgtaccaggtttaggttctctcccttgccagaaaaagaaatacaagtcaaggtggat
gaggtcgtgcaaaaagaaggggtgaaccttacggatgatggtcgggatgcgcttctcaaa
ttatctcgaggcgatatgcgacgggccctcaacgtcctccaggcatgtcacgcggcgtac
gatatagttgatgaaacggccgtttacaactgtacaggtaacccgcaccccagggatatc
gagcgtgtcgtacagagtatgatggcagacgaattcgggaccgcttactcgcttatcacc
tcacttaaaattgaaaaaggtcttgcgctgcaagatttgattgcaggcgcatacgaattc
ttagatactgtcgaattgccaaagcaaagcaggatatacctgctcgatcatctgggaagt
accgagcaccgactatcattaggcggttcggaaaagatgcagctcacagcattgttggga
gcgttcaaagtcgccgtagaactttctcagagaaagatttga

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