Cryptococcus deneoformans B-3501A: CNBN0610
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Entry
CNBN0610 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03030
DNA replication
cnb03410
Base excision repair
cnb03420
Nucleotide excision repair
cnb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNBN0610
03410 Base excision repair
CNBN0610
03420 Nucleotide excision repair
CNBN0610
03430 Mismatch repair
CNBN0610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnb03032
]
CNBN0610
03036 Chromosome and associated proteins [BR:
cnb03036
]
CNBN0610
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBN0610
DNA replication proteins [BR:
cnb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CNBN0610
DNA Replication Termination Factors
ELG1-RFC complex
CNBN0610
Chromosome and associated proteins [BR:
cnb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CNBN0610
DNA repair and recombination proteins [BR:
cnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CNBN0610
Check point factors
HRAD17(Rad24)-RFC complex
CNBN0610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
DUF815
AAA_16
AAA_11
AAA_30
AAA_22
AAA_assoc_2
RCF1-5-like_lid
RuvB_N
AAA_5
AAA_3
AAA_24
AAA_19
AAA_18
DEAD
ATPase_2
AAA_28
ResIII
nSTAND3
bpMoxR
Mg_chelatase
AAA_33
AAA_7
AAA_25
Viral_helicase1
MCM
RNA_helicase
TIP49
HVO_0513_N
Motif
Other DBs
NCBI-GeneID:
4939670
NCBI-ProteinID:
XP_771880
LinkDB
All DBs
Position
14:204828..206648
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AA seq
373 aa
AA seq
DB search
MAEPMDIDTPTSGPASGAQPRNAMAALMANAKGKGKEIASPAADGKAVDDKEGLPWVEKY
RPVSLDDVVSHKDITSTIEKFIEAGRLPHLLLYGPPGTGKTSTVLALARRLYGPAYRKHI
LELNASDDRGIDVVREQIKNFAMTKVLFSKGFKLVILDEADMMTQAAQSALRRVIEQHTK
NVRFCILCNYVNKITPAIQSRCTRFRFSPLPEKEIQVKVDEVVQKEGVNLTDDGRDALLK
LSRGDMRRALNVLQACHAAYDIVDETAVYNCTGNPHPRDIERVVQSMMADEFGTAYSLIT
SLKIEKGLALQDLIAGAYEFLDTVELPKQSRIYLLDHLGSTEHRLSLGGSEKMQLTALLG
AFKVAVELSQRKI
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccaatggacatagacacgcctacttccggcccagcttccggcgcccaacct
cgaaacgcgatggcggcgctcatggcgaacgcgaagggaaaaggcaaggagattgcctcc
ccagctgcggatggaaaggccgtggatgacaaagagggtcttccttgggtggagaagtac
agacctgtttcgcttgacgacgttgtctcacacaaggatattaccagtaccatcgaaaag
tttatcgaagccggacgattaccgcatctcttgttatacggacccccaggtactggtaaa
acatcgaccgtcctcgcccttgcccgtcggctatatggacctgcgtacaggaaacatatc
ctcgagttgaacgcttcagatgatcgagggattgatgtggtgcgagagcagattaagaat
ttcgcaatgaccaaggtgctattctcaaaaggtttcaagctggtcattttagatgaagcg
gatatgatgacacaagcagctcaatctgcacttcgtcgagtgatcgaacagcacactaag
aatgtgcgattctgtatcctctgcaactatgtcaacaaaatcacccctgctatccaatct
cgatgtaccaggtttaggttctctcccttgccagaaaaagaaatacaagtcaaggtggat
gaggtcgtgcaaaaagaaggggtgaaccttacggatgatggtcgggatgcgcttctcaaa
ttatctcgaggcgatatgcgacgggccctcaacgtcctccaggcatgtcacgcggcgtac
gatatagttgatgaaacggccgtttacaactgtacaggtaacccgcaccccagggatatc
gagcgtgtcgtacagagtatgatggcagacgaattcgggaccgcttactcgcttatcacc
tcacttaaaattgaaaaaggtcttgcgctgcaagatttgattgcaggcgcatacgaattc
ttagatactgtcgaattgccaaagcaaagcaggatatacctgctcgatcatctgggaagt
accgagcaccgactatcattaggcggttcggaaaagatgcagctcacagcattgttggga
gcgttcaaagtcgccgtagaactttctcagagaaagatttga
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integrated database retrieval system