Cryptococcus deneoformans B-3501A: CNBN1090
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Entry
CNBN1090 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03440
Homologous recombination
cnb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CNBN1090
03450 Non-homologous end-joining
CNBN1090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnb03032
]
CNBN1090
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBN1090
DNA replication proteins [BR:
cnb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
CNBN1090
DNA repair and recombination proteins [BR:
cnb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
CNBN1090
BRCA1-C complex
CNBN1090
NHEJ (non-homologous end-joining)
MRX complex
CNBN1090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
AAA_13
Roc
DUF3502
AAA_16
AAA_15
YqaH
GTP_EFTU
Rot1
AAA_22
Motif
Other DBs
NCBI-GeneID:
4939718
NCBI-ProteinID:
XP_771929
LinkDB
All DBs
Position
14:337691..342905
Genome browser
AA seq
1329 aa
AA seq
DB search
MASLNKLAIRGIRSFDDKHVQVIEFYSPLTVIVGHNGSGKTTIIECLKYATTGDMPPNTK
GGAFVHDPKMAGEKEVKAQVRLRFWNAKRERMTATRNLQVTTKKTGQLTMKTLEGILAKT
DVGDSSGKRNTISTKCSEMDEEVPYLLGVSRAILENVIFCHQEESNWPLSEPAALKKKFD
DIFEATKYTKALDNIKTLRKERMAELKVDKERLKFLKADKDKAERLRKDLEESISQENRK
QTELDNLKERYETIKIRNAEFYEEATHFRQIYEQSKSLKEKKKMYEDNRKHSKLNMQEMD
ESTEELLHMQQNFDAHLRTLTMQRSEKEDAKEKEESELEDLRVKERNLANRQGGLVAHRQ
TYERNLREREAAIRQIAKAHDLVGYDYSPLEDSKVAEFVDKIYEMVRKAENDLKKLQTEN
SRKERELQEELDRLSTMKTSAQATKKSKEEQIIRLTEKIRTSEATFHSISNPSVELELNQ
NKLTELEADLSKFQAEITDAKYDEKINQKGLLIRQKELERDNISAELAVLNRKADSRAKL
DLQRNELEGKNSQISTLLKTHEAKFRELVEVDIHDVKPEDIEDKVIGAISRKDRDLIQEE
NNASALNRDHSQVQASLSRAREELAIKKREIHNMQREIEAAIYNVNQPAEEEEVPAEEAK
NLAEAFDICRSEIESVQRAIMDKQGSRVVWEGLLTTVKAGGVCEACNRGIKHEEKNAVTR
HMEAKIRQLMEAEQAGVDAEIEVEKSWTEILDTLIRVEPHEAKIQDLQRRVIPRLETQIK
EGEEKLRSLVKEVDESKTSIQKLKSASRDLQNLKATASYINRLYIETGDLKANVKRLQTE
LESSGSSKTVEEVQKEVDRVSQEIKTLSREQQAFSSEKELKVNALRATQDEIGRKSLHIG
RLKAQQDKRKMEEEALSDMQNTLGTLHDELRDLDQTVQAAEAPWKEKNETLGRFRTERAN
AEKEASTQVRMYQSSLGEIEGKHKACQAYVAEGNDRKIRENEAAMSEIKRQISQSNDARA
ALEAEISALSSELSKSESLKANIRSNLKYREDGKKIEMVQAELDELDLDSAAESRAKFNK
EYKGMLDEETEAQGLMAITQGGLLEMRTNRQKMEKTLKTDYKNIDKEHKEQLIKTTISEY
ANNDLEKYGKALDNAILKYHSIKMDEINDTIGHLWNKTYQGTDIDGIRIVSDHDEASTST
RKSYNYRVVMVKNEVELDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLALDEPTTNLD
QENINALAESLAEIIRERRQQANFQLIVITHDEGFLQRLAEQDVVEYYWRVSRDASQKSV
LERQRVGRG
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctcaataagcttgccattcgaggcatccgttctttcgatgacaagcatgtc
caagtcatagaattctattcaccacttactgtaattgttggacacaatggtagtggcaag
actacaatcatcgagtgcttgaaatacgctaccaccggtgacatgccgcccaatactaag
ggcggagccttcgttcatgacccaaagatggctggtgagaaggaagtcaaggctcaagtc
cgtttgagattctggaatgccaagcgggagcgtatgacggcaactcgaaatttacaagtg
acgacgaagaagactggtcaattgaccatgaagacgctggaaggtatactggctaagacg
gatgttggtgattcaagtgggaagagaaataccatctctacgaaatgttcagaaatggat
gaagaagttccatacttgttgggcgtgtcgagggccattcttgagaatgtgatcttctgt
catcaagaagagtctaattggccgctttctgaaccggccgcattaaaaaagaaatttgac
gacatcttcgaagctaccaagtatacgaaagctttggacaatattaaaactttaagaaaa
gaacgaatggccgagctcaaagttgacaaggagagactcaagttcctcaaggctgacaag
gacaaggctgagcgtttgcgcaaggatttggaagagtcaatttcccaagaaaaccgtaaa
caaacagaactcgacaacctcaaagaacgatatgaaactatcaagattcgtaacgccgaa
ttttacgaggaagcaacacatttccgacaaatctatgaacagtcgaagtcgttgaaggag
aaaaagaagatgtatgaggacaaccgaaagcattcaaagttgaatatgcaagagatggat
gaatcgactgaggaactcctccatatgcagcaaaacttcgacgcccaccttcgaaccctt
accatgcagcgatcagaaaaggaggatgcgaaagagaaggaggaatctgagttggaggac
cttcgtgtaaaggagaggaatcttgctaataggcagggtgggctggttgctcatcgtcaa
acgtacgagcgtaatttgagagagcgtgaagctgcgataaggcagatcgctaaggctcat
gatctggtgggatacgattactctcctttggaagattcgaaagttgcagagttcgtggat
aaaatttatgagatggtgaggaaggcagaaaatgatttgaagaaacttcagacggagaac
agtaggaaggaaagagaattgcaagaggaactggaccggttgtcaaccatgaagacgtct
gcccaagctacgaaaaagagcaaagaggaacaaatcattagacttaccgagaagatccgc
acatctgaggcaaccttccattccatctctaacccctctgtggaactcgaactcaaccag
aataagcttacagagttggaggcagacctctcaaaattccaagctgagatcactgatgcc
aagtatgacgagaagattaaccaaaaaggccttttgatcaggcaaaaggagctggagagg
gataatatcagtgcagagttggctgtgttgaacaggaaggcagactcgagggcgaagtta
gatctgcagaggaacgagttggagggcaaaaactcacaaatatcaacattattaaaaacc
cacgaggctaagtttagagagctcgtcgaggtagatatacatgatgtcaaaccagaagac
atagaggataaggtcattggtgccatcagtcgaaaggacagagatctcatacaagaagaa
aacaatgcatcagctctcaacagggatcattctcaagtacaagcatcgcttagtcgagct
cgagaggaactcgcaatcaagaagcgagagattcacaacatgcaacgcgagattgaggct
gcgatttacaatgtcaaccagccggctgaagaggaggaagtgcctgctgaggaggccaag
aatttggcggaggcctttgatatctgtcgaagcgagattgaaagtgtgcaacgagcgatc
atggacaagcaagggagcagggtcgtatgggaaggattgctcacaacggtcaaagcgggt
ggagtctgtgaagcctgtaaccgtgggatcaagcacgaggagaagaatgctgtcactaga
catatggaagcaaaaatccggcaactcatggaagctgagcaagctggggttgacgctgaa
attgaagtggaaaagtcatggactgagatcctcgatacccttatcagagttgagcctcat
gaagcgaaaattcaggacttgcagagaagggtcatccctcgtttggagacgcagatcaag
gaaggggaggaaaagcttcgttcattggtgaaagaggttgatgagtcaaagacatcaatc
cagaagcttaagtccgcctctcgtgatttacaaaatctcaaggctacagcgtcctatatc
aatcgcttgtacattgagaccggtgatttgaaagcgaacgtgaagagacttcaaaccgag
ctagagagttctggtagctctaagacggtggaggaggtacaaaaagaggtggatcgggtg
agccaggaaatcaaaacgctgtcgcgagagcagcaagccttttcttccgaaaaagagctt
aaggtcaatgctcttcgggcgactcaagacgaaatcggacgcaagagccttcatattggt
aggctcaaggctcaacaggacaagagaaaaatggaggaggaagctttgagcgatatgcag
aacactctcggaacactccatgacgaacttcgggatctggaccagactgttcaggccgcg
gaggctccttggaaggaaaagaatgaaacactcggcagattcaggacagaacgggcgaat
gcagagaaagaagctagcacacaagttaggatgtatcagtcaagtttaggggagattgaa
gggaagcacaaagcttgtcaagcatatgtggcggagggtaatgacaggaagatccgagag
aatgaggcagccatgtctgaaattaaacgtcaaatctcacaatccaatgacgctcgcgct
gcgctcgaagctgaaatatctgctttgtcatccgagctttcaaaatccgaatcacttaaa
gcaaacatcagaagtaacctgaagtatcgcgaagacgggaagaaaatcgagatggtccaa
gcagaacttgacgagttggatttggacagtgctgctgaaagtagagccaagttcaataaa
gaatacaaggggatgctggacgaagagacagaagctcagggcctaatggcaatcacccaa
ggaggtctgctggaaatgaggacaaatcgccaaaaaatggagaaaactttgaagacggat
tacaagaacatcgacaaggaacacaaagagcaactaatcaagactacaattagtgaatat
gcgaataatgaccttgagaagtacgggaaagccctggataacgcgatcctcaagtatcac
tccatcaagatggatgagatcaacgatactattggtcatctttggaacaaaacttatcaa
gggactgatatcgacgggatccgaattgtttccgatcatgacgaggcttcgacaagtact
cgcaagagttataactatagagtggtcatggtgaagaatgaagtggagctggacatgaga
ggaagatgctctgctggtcagaaggtattggctagcatcatcattagattggctctggca
gagagttttggacaaggctgtggtgttttggcccttgatgaaccgactacgaatctggat
caagagaatatcaatgcgctggccgaatctctggctgagatcattcgggaacgccgacaa
caagccaacttccagcttatcgtgatcacacacgacgaagggttcttgcagcgtttggcg
gagcaggatgttgttgagtattactggcgagtgtcaagagacgcttcgcagaagagtgtg
ttggagagacagagagtaggtagaggatag
DBGET
integrated database retrieval system