Cupriavidus necator N-1: CNE_1c00030
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Entry
CNE_1c00030 CDS
T01564
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cnc
Cupriavidus necator N-1
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnc03032
]
CNE_1c00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
cnc03400
]
CNE_1c00030 (gyrB)
Enzymes [BR:
cnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CNE_1c00030 (gyrB)
DNA replication proteins [BR:
cnc03032
]
Prokaryotic type
DNA Topoisomerases
CNE_1c00030 (gyrB)
DNA repair and recombination proteins [BR:
cnc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CNE_1c00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AEI75373
UniProt:
G0ERU5
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All DBs
Position
1:3557..6082
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AA seq
841 aa
AA seq
DB search
MTEQQNPQQENTYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCTEIQVTIHSDNSISIVDNGRGIPPLVKFDDKHEPKRSAAEIAMTELHAGGKFNQNS
YKVSGGLHGVGVSCVNALSKWLRLTVRRDGQVHLIEFAKGDVQNRIVETVTGPDGQPVEV
SPMKIIGATDKRGTEVHFLADEEIFTNVEFHYEILSKRIRELSFLNNGVHIKLVDQRTGK
EEDFAFSGGVKGFVEYINRSKSVLHPTIFYANTEKDGIAVEVAMQWNDGYNEQVLCFTNN
IPQRDGGTHLTGLRAAMTRVINKYIEENEVAKKAKVETTGDDMREGLSCVLSVKVPEPKF
SSQTKDKLVSSEVRLPVEELVGKALSDFLLETPGDAKIICGKIVDAARAREAARKAREMT
RRKGLMDGMGLPGKLADCQEKDPALSELFLVEGDSAGGSAKQGRDRKFQAILPLKGKILN
VERARFDKMLSSQEVLTLITALGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHIRTLLLT
FFYRQMPDIIERGYVYIAQPPLYKIKHGKEERYIKDDVELNAYLLKLAMEKAVLVRPDGT
EINGDALTELARQYQLTEGVISRLSRIVDTDALRAIADGVALDLDSAAAAEASAVALKAK
LAEMHAKTLIGAAVNDDGTADVYAQFDEKTDKHRLMIARRHHGNVRLSHLDADFVHGADY
AALSNAAKTFQGLTPEGTKVQRGEGEKLRDQTVNDFHGAMQWLLAEAERGVSRQRYKGLG
EMNPEQLFETTLDVTQRRLLKVQIEDAIAADQIFTTLMGDEVEPRRNFIESNALVARNID
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagcagaacccgcagcaggaaaacacctacggagcctcttcgatccagatt
ctggaaggcctggaggcggtacgcaagcgcccgggcatgtatatcggtgatacctccgac
ggcaccggcctgcaccaccttgtcttcgaggtgctggacaactccatcgacgaagcgctg
gccggctactgcaccgagatccaggtcaccatccacagcgacaactcgatctccatcgtc
gacaacggccgcggcatcccgcccctggtcaagttcgacgacaagcacgaacccaagcgc
agcgcggcggaaatcgccatgaccgagctgcacgccggcggcaagttcaaccagaacagc
tacaaggtgtccgggggcctgcacggcgtgggcgtgtcctgcgtgaacgccctgtccaag
tggctgcgcctgaccgtgcgccgcgacggccaggtccacctgatcgaattcgccaagggc
gacgtacagaaccgcatcgtcgagaccgtgaccggccccgacggccagcccgttgaagtc
tcgccgatgaagatcatcggcgccaccgacaagcgcggcaccgaagtgcacttcctggcc
gacgaagaaatcttcaccaacgtcgagttccactacgagatcctctccaagcgcatccgc
gagctctcgttcctgaacaacggcgtgcacatcaagctggtcgaccagcgcaccggcaag
gaggaagactttgccttctccggcggcgtgaagggttttgtcgagtacatcaaccgctcc
aagagcgtgctgcaccccaccatcttctacgccaacaccgaaaaagacggtatcgccgtg
gaagtggccatgcagtggaacgacggctacaacgagcaggtgctctgcttcaccaacaac
atcccgcagcgggatggcggcacccacctgaccggcctgcgcgccgcgatgacccgcgtc
atcaacaagtacatcgaagagaacgaagtcgccaagaaagccaaggtggaaaccaccggc
gacgacatgcgcgaaggcctgtcctgcgtgctctccgtcaaggtgcccgagcccaagttc
agctcgcagaccaaggacaagctggtctcttccgaagtgcgcctgccggtggaagaactc
gtcggcaaggccctgagcgacttcctgctggaaaccccgggcgatgccaagatcatctgc
ggcaagatcgtcgacgccgcccgcgcccgcgaagccgcccgcaaggcccgcgaaatgacg
cgccgcaagggcctgatggacggcatgggcctgcccggcaagctggcagactgccaggaa
aaagaccccgccctgtcagaactcttcctggtggagggcgactccgcaggcggctccgcc
aagcaaggccgcgaccgtaagttccaggccatcctgcccctgaagggcaagatcctgaac
gtagaacgcgcccgcttcgacaagatgctgtccagccaggaagtgctgaccctgatcacc
gcactgggcaccggcatcggcaaggacgactacaacctggacaagctgcgctaccaccgc
atcatcatcatgaccgatgctgatgtggacggctcgcacatccgcaccctgttgctgaca
ttcttctaccgccagatgcccgacatcatcgagcgcggctacgtctatatcgcgcagccg
ccgctgtacaagatcaagcacggcaaggaagagcggtatatcaaggatgatgtcgagctc
aatgcctacctgctgaagctggcgatggagaaggctgtgctggtgcggccggatgggact
gagatcaatggggatgcgctgactgagttggcgcggcagtatcagctgactgagggggtg
atttctcgcctgtcacggattgttgataccgatgccctgcgtgctattgctgatggggtg
gcgctggatctggacagcgcggctgctgctgaggcgtctgctgtggcgttgaaggctaag
ttggctgagatgcatgccaagacgttgattggggcggctgttaatgatgatggcactgct
gatgtctatgcgcagtttgatgagaagacggataagcatcggttgatgattgcgcgtcgt
catcatgggaacgtgcggttgtcgcatctggatgcggacttcgtccatggtgctgactat
gctgctctctccaatgcggccaagactttccaggggctgactccggaaggcaccaaggtg
cagcggggcgaaggcgaaaagctgcgtgatcagactgtcaatgacttccacggggccatg
caatggctgctggctgaggctgagcgtggggtttctcgtcagcggtataaggggctgggg
gagatgaatcctgagcagttgtttgagacgacgctggacgttactcagcgccgactgctg
aaggtgcagattgaggatgctattgcggcggatcagatcttcactacgctgatgggggat
gaggtggagccgcgtaggaactttattgagagtaatgcgctggtggcgaggaatattgac
gtctga
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