Cupriavidus necator N-1: CNE_1c04030
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Entry
CNE_1c04030 CDS
T01564
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc02020
Two-component system
cnc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CNE_1c04030 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CNE_1c04030 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnc03021
]
CNE_1c04030 (rpoN)
Transcription machinery [BR:
cnc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CNE_1c04030 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_IclR
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
AEI75768
UniProt:
G0EUQ7
LinkDB
All DBs
Position
1:complement(396729..398210)
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AA seq
493 aa
AA seq
DB search
MKPSLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVEQALTENPLLERENDWIESPLRV
AADGSVNLQSAPAPAPAEPQGNGEARADGAGDDDSYGDSGNGDDYGSGDWSLDDFARRPQ
GDEDEKTPMQLREAEPTLREYLMEQLTPLKISARDKGLAIFLIESLDDDGYLSASLEEIC
TELPEELEFEIDEVHAILTLLQSFDPPGVGARNAAECLALQLRRLTHPQRELALNIVSNH
LELLAVRDYTRLKKALQVDEVALKSAHELIRSLAPYPGHAYSRPEADFVVPDVFVRKGGG
GWIAQLNPDVMPRLRINDMYAQILRGAKGESGTAGLQQKLQEARWLIKNIQQRFDTILRV
SQAIVERQKNFFSHGEIAMRPLVLREIADTLGLHESTISRVTTNKYMATPMGTFELKYFF
GSHVSTETGGAASSTAIRALIKQLIGAEDPRNPLSDSRIAELLGEQGFVVARRTVAKYRE
ALKIPAVNLRKSL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtcgctacagctccgtctttcccagcatctggccctgaccccgcaactgcag
cagtcgatccggctgctgcagctctccacgctggaactgcagcaagaggtcgaacaggcg
ctgacggaaaacccgctgctcgagcgcgagaacgactggatcgaaagcccgctgcgcgtg
gcggccgacggctcggtcaacctgcagagcgcaccggcgcccgccccggctgagccccag
ggcaatggcgaggctcgcgccgacggcgcgggtgacgacgacagctatggcgacagcggc
aacggcgacgactacggcagcggcgactggagcctggacgactttgcccgccgcccccag
ggcgacgaggatgaaaaaacgccgatgcagctgcgcgaggccgagcccacgctgcgcgag
tacctgatggagcagctcacgccgctgaagatctcggcgcgcgacaaaggcctggccatc
ttcctgatcgaatcgctcgacgacgatggctacctgagcgcatcgcttgaggagatctgc
acggagttgccggaagaactcgagttcgagatcgacgaagtccacgccatcctcacgctg
ctgcagagtttcgacccgcccggcgtgggtgcgcgcaacgccgccgagtgcctggccctg
cagttgcgacgcctgacgcacccgcaacgcgaactggcgctgaacatcgttagcaatcac
ctggagttgctcgcagtacgcgactacacgcggctgaagaaggcgctgcaggtagatgaa
gtggcactgaagtccgcacacgaactgatccgctcgctggcgccctaccccggccatgcg
tacagccgcccggaagcggatttcgtggtgccggacgtgttcgtgcgcaagggtggcggc
ggctggatcgcgcagctcaatccggatgtgatgccgaggctgcgcatcaacgatatgtat
gcccaaatcctgcgtggcgcgaagggtgagtccggcacggccggactgcagcaaaagctg
caagaggcgcgctggctgatcaagaacatccagcaaaggttcgacacaatcctgcgtgtc
tcgcaggccattgtcgagcgtcaaaagaactttttcagtcacggcgaaatcgccatgcgc
cccttggttttgcgggagattgccgatacactgggtttacacgagtcaaccatctcccgg
gtgacgaccaataaatacatggcaacgccgatgggtactttcgaactgaagtacttcttc
ggcagccacgtgtccaccgaaaccggtggcgcggcttcatcaacggccatccgcgccttg
atcaagcaactgataggagccgaagacccgaggaatcccctttccgacagtcgcattgcc
gaactgctgggtgagcaaggctttgttgttgcgcgccgcactgttgccaagtatcgcgaa
gccctgaagatccccgcagtcaatctccgcaagtctttgtag
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