Cupriavidus necator N-1: CNE_1c05590
Help
Entry
CNE_1c05590 CDS
T01564
Symbol
ycbB
Name
(GenBank) L,D-transpeptidase YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
cnc
Cupriavidus necator N-1
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cnc01002
]
CNE_1c05590 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cnc01011
]
CNE_1c05590 (ycbB)
Peptidases and inhibitors [BR:
cnc01002
]
Cysteine peptidases
Family C82
CNE_1c05590 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cnc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CNE_1c05590 (ycbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AEI75924
UniProt:
G0EW32
LinkDB
All DBs
Position
1:564241..565833
Genome browser
AA seq
530 aa
AA seq
DB search
MPPTLNAAARRLGAVVLACAAACLAMPAFANEPMWFAQGRPVPAARQAVDALAAAAADGL
DPRDYDADALRQAVVQAASGPALPPDAAARVDAALSAAMERMLADLHGGRVNPRAVHANF
APQAERPFDAATWLRDAVTQQRLPDAIRQAAPTFPLYGTLREALARYREIAKQPAWGQPL
PPLPGSKLTPGQPWAGAAALNARLVALGDLPAGAQAPARYEGALVGGVKAFQSRHGLEAD
GVIGAGTLAQLNLPIASRVRQIELTMERLRWTPLDGPRMIVVNVPEFMLRAYEIRDGKLD
IKLEMKVIVGKALDTRTPLFEEDMRYIEFSPYWNIPPSIARRETVPHLRSDPAYFNRQGL
EFVSGDGKAVTTLSDENLDAVLNGRMRIRQRPGPLNALGDIKFVFPNNENIYLHHTPSPQ
LFKRDRRDFSHGCIRVEAPVALAQFVLQDMPDWNETRIREAMTRGKSNTVRLQQPLPVVL
AYGTVIARADGRVSFLPDIYGHDKLLDKALRQRNGRPQQPAIASASGTTH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaccctgaatgccgccgcgcgccgcctaggcgctgtcgtgcttgcctgtgcc
gccgcgtgcctggccatgcctgccttcgccaatgagccgatgtggtttgcgcagggccgt
ccggtgccggctgcgcgccaggccgtcgatgcgctggccgcggccgcggccgacggcctc
gatccacgcgactacgatgccgacgccttgcgccaggcggtggtccaggccgccagcggg
ccagccctgccgccggacgcggccgcacgcgtggatgccgcgctgagcgccgcgatggag
cggatgctggcagacctgcacggcggacgcgtcaacccgcgcgcggtccatgccaacttt
gccccgcaggcggaacggcccttcgatgccgccacctggctgcgcgatgccgtcacgcag
cagcggctgcccgacgccatccgccaggcagcgcccaccttcccgctctatggcacgctg
cgggaggccctggcgcggtaccgcgagatcgcgaagcagccggcctgggggcagccgctg
ccaccgttgccggggagcaagctgacgccgggccagccctgggccggtgccgcggcgctg
aatgcacgcctggttgcgctgggcgacttgcccgccggcgcccaggcgccggcccgctac
gaaggcgccctggtcggcggcgtcaaggcgttccagtcgcgccacggcctggaggccgac
ggcgtgatcggcgcgggcacgctggcacaactcaacctgcccatcgccagccgtgtgcgg
caaatcgaactgaccatggagcggctgcgctggacgccgctggacggtccgcgcatgatc
gtggtcaatgtgccggagttcatgctgcgcgcctatgagatccgcgacggcaagctcgac
atcaagctcgagatgaaggtgatcgtcggcaaggcactggatacgcgcacgccgctgttc
gaggaggatatgcgctacatcgagttcagcccgtactggaacatcccgccctcgatcgcg
cgccgcgagaccgtgccgcacctgcgcagcgatccggcttacttcaaccggcagggcctg
gagttcgtcagcggcgacggcaaggccgtgaccacgctgtccgacgagaatctcgacgcc
gtgctgaacggccgcatgcgcatccgccagcggccgggcccgctgaacgcgctgggcgat
atcaagttcgtgtttcccaacaacgagaacatctacctgcatcacacgccctcgccgcag
ctgttcaagcgcgaccggcgcgacttcagccatggctgcatccgcgtggaagccccagta
gcattggcccagttcgtgttgcaggatatgccggactggaacgagacccggatccgcgaa
gcgatgacgcgtggcaagtccaatacggtgcgcctgcagcagcccttgccggtggtgctg
gcctacggcacggtcattgcgcgcgccgatggtcgtgtatccttcttgcctgacatctac
ggtcacgacaaattgctggacaaggcactgcggcaacgcaacggacggccccagcaacca
gctattgcgagcgcctccggcaccacccactga
DBGET
integrated database retrieval system