KEGG   Cupriavidus necator N-1: CNE_1c05590
Entry
CNE_1c05590       CDS       T01564                                 
Symbol
ycbB
Name
(GenBank) L,D-transpeptidase YcbB
  KO
K21470  L,D-transpeptidase YcbB
Organism
cnc  Cupriavidus necator N-1
Brite
KEGG Orthology (KO) [BR:cnc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cnc01002]
    CNE_1c05590 (ycbB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cnc01011]
    CNE_1c05590 (ycbB)
Peptidases and inhibitors [BR:cnc01002]
 Cysteine peptidases
  Family C82
   CNE_1c05590 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:cnc01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   CNE_1c05590 (ycbB)
SSDB
Motif
Pfam: Scaffold YkuD PG_binding_1
Other DBs
NCBI-ProteinID: AEI75924
UniProt: G0EW32
LinkDB
Position
1:564241..565833
AA seq 530 aa
MPPTLNAAARRLGAVVLACAAACLAMPAFANEPMWFAQGRPVPAARQAVDALAAAAADGL
DPRDYDADALRQAVVQAASGPALPPDAAARVDAALSAAMERMLADLHGGRVNPRAVHANF
APQAERPFDAATWLRDAVTQQRLPDAIRQAAPTFPLYGTLREALARYREIAKQPAWGQPL
PPLPGSKLTPGQPWAGAAALNARLVALGDLPAGAQAPARYEGALVGGVKAFQSRHGLEAD
GVIGAGTLAQLNLPIASRVRQIELTMERLRWTPLDGPRMIVVNVPEFMLRAYEIRDGKLD
IKLEMKVIVGKALDTRTPLFEEDMRYIEFSPYWNIPPSIARRETVPHLRSDPAYFNRQGL
EFVSGDGKAVTTLSDENLDAVLNGRMRIRQRPGPLNALGDIKFVFPNNENIYLHHTPSPQ
LFKRDRRDFSHGCIRVEAPVALAQFVLQDMPDWNETRIREAMTRGKSNTVRLQQPLPVVL
AYGTVIARADGRVSFLPDIYGHDKLLDKALRQRNGRPQQPAIASASGTTH
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgcctccgaccctgaatgccgccgcgcgccgcctaggcgctgtcgtgcttgcctgtgcc
gccgcgtgcctggccatgcctgccttcgccaatgagccgatgtggtttgcgcagggccgt
ccggtgccggctgcgcgccaggccgtcgatgcgctggccgcggccgcggccgacggcctc
gatccacgcgactacgatgccgacgccttgcgccaggcggtggtccaggccgccagcggg
ccagccctgccgccggacgcggccgcacgcgtggatgccgcgctgagcgccgcgatggag
cggatgctggcagacctgcacggcggacgcgtcaacccgcgcgcggtccatgccaacttt
gccccgcaggcggaacggcccttcgatgccgccacctggctgcgcgatgccgtcacgcag
cagcggctgcccgacgccatccgccaggcagcgcccaccttcccgctctatggcacgctg
cgggaggccctggcgcggtaccgcgagatcgcgaagcagccggcctgggggcagccgctg
ccaccgttgccggggagcaagctgacgccgggccagccctgggccggtgccgcggcgctg
aatgcacgcctggttgcgctgggcgacttgcccgccggcgcccaggcgccggcccgctac
gaaggcgccctggtcggcggcgtcaaggcgttccagtcgcgccacggcctggaggccgac
ggcgtgatcggcgcgggcacgctggcacaactcaacctgcccatcgccagccgtgtgcgg
caaatcgaactgaccatggagcggctgcgctggacgccgctggacggtccgcgcatgatc
gtggtcaatgtgccggagttcatgctgcgcgcctatgagatccgcgacggcaagctcgac
atcaagctcgagatgaaggtgatcgtcggcaaggcactggatacgcgcacgccgctgttc
gaggaggatatgcgctacatcgagttcagcccgtactggaacatcccgccctcgatcgcg
cgccgcgagaccgtgccgcacctgcgcagcgatccggcttacttcaaccggcagggcctg
gagttcgtcagcggcgacggcaaggccgtgaccacgctgtccgacgagaatctcgacgcc
gtgctgaacggccgcatgcgcatccgccagcggccgggcccgctgaacgcgctgggcgat
atcaagttcgtgtttcccaacaacgagaacatctacctgcatcacacgccctcgccgcag
ctgttcaagcgcgaccggcgcgacttcagccatggctgcatccgcgtggaagccccagta
gcattggcccagttcgtgttgcaggatatgccggactggaacgagacccggatccgcgaa
gcgatgacgcgtggcaagtccaatacggtgcgcctgcagcagcccttgccggtggtgctg
gcctacggcacggtcattgcgcgcgccgatggtcgtgtatccttcttgcctgacatctac
ggtcacgacaaattgctggacaaggcactgcggcaacgcaacggacggccccagcaacca
gctattgcgagcgcctccggcaccacccactga

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