Cupriavidus necator N-1: CNE_1c13940
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Entry
CNE_1c13940 CDS
T01564
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNE_1c13940 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnc03400
]
CNE_1c13940 (xthA)
Enzymes [BR:
cnc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CNE_1c13940 (xthA)
DNA repair and recombination proteins [BR:
cnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CNE_1c13940 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEI76741
UniProt:
G0ESU4
LinkDB
All DBs
Position
1:complement(1400900..1401730)
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AA seq
276 aa
AA seq
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MSAAALPASGPLRIASWNVNSLKVRLPQVLQWLAEQDQAGAPIDALCLQELKLPDDKYPL
AELENAGFHSIYTGQKTYNGVAILARDASMPGPADVVRNIPGFEDAQQRVIAATYGDVRL
VCAYFPNGQALDSDKFVYKLKWLDAMTAWLREEMKRYPKLALLGDFNIAPEDRDVHDPKK
WEGQNLVSPQERAAFAALVELGLADAFRQFEQPEKAFSWWDYRMMAFRRNAGLRIDHILL
SPALTSGCSACVIDRVPRTWEQPSDHTPVVATLSCG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccgccctgcccgccagcggcccgcttcgcattgccagctggaacgtcaac
tcgctcaaggtgcgcctgccgcaggtgctgcaatggctggccgagcaggaccaggccggc
gcgccgatcgacgcgctgtgcctgcaggaactgaagctgccggacgacaagtacccgctg
gccgagctggagaacgcgggcttccacagcatctacaccgggcagaagacatacaacggc
gtggccatcctcgcccgcgacgccagcatgcccggccccgccgacgtggtgcgcaacatc
cccggcttcgaggacgcgcagcagcgcgtgatcgcggccacgtacggcgacgtgcggctg
gtctgcgcctactttcccaacgggcaggcgctggactcggacaagttcgtctacaagctc
aagtggctggatgcgatgacggcctggctgcgcgaagagatgaagcgctacccgaagctg
gcgctgctgggcgacttcaatatcgcgccggaagaccgcgacgtgcacgaccccaagaaa
tgggaaggccagaacctggtctcgccacaggagcgcgctgcattcgccgccctggtggaa
ctcggcctggcggatgcgttccgccagttcgagcagcccgagaaggccttctcgtggtgg
gactaccgcatgatggcattccgccgcaatgcgggcctgcgcatcgaccacatcctgctg
tcgccggcattgaccagcggctgcagcgcctgcgtgatcgaccgcgtgccgcgcacgtgg
gagcagccgtcggaccacacgccggtggtggccacactcagctgcggctga
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