Cupriavidus necator N-1: CNE_1c22130
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Entry
CNE_1c22130 CDS
T01564
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cnc
Cupriavidus necator N-1
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnc03016
]
CNE_1c22130 (truB)
Enzymes [BR:
cnc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CNE_1c22130 (truB)
Transfer RNA biogenesis [BR:
cnc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CNE_1c22130 (truB)
Prokaryotic type
CNE_1c22130 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AEI77547
UniProt:
G0EZW2
LinkDB
All DBs
Position
1:complement(2283172..2284119)
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AA seq
315 aa
AA seq
DB search
MTDSNANRPPRLPRREVHGVLLLDKPLGLSSNDALVRAKRLLRAAKAGHTGTLDPLATGL
LPLCFGEATKFSQDLLEADKTYDAVVRLGARSSTGDAEGELLDVREVTCDRAAVEQALAS
FLGEIEQVPPMHSALKKDGRPLYEYARAGQTVERAARRVTIRSIALLDCALPNAPSFTMR
VTCSKGTYIRTLAEDIGEALGCGAHLTGLRRIAVGDLTLDGAVTLEQIEQHDDAQRPTML
APVDALLQKCAPVHLDEAAATRFLQGQRIAQRDLPAGTGLAEDALARVYAGEPARLLGVA
RMREGALRPERLVKL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattccaacgccaaccgtccgccgcgcctgccgcgccgcgaggtccatggtgtg
ctgctgctcgacaagccgctgggcctgtcgtccaacgacgcgctggtgcgcgccaagcgc
ctcttgcgcgcggccaaggcaggccataccggcacgctggacccgcttgccacggggctg
ctgccgctgtgcttcggcgaggccaccaagttttcgcaagacctgctggaagcggacaag
acctatgacgccgtagtgcggctgggcgcgcgctcgagcacgggcgacgccgaaggcgaa
ctgctcgacgtgcgcgaggtcacctgcgaccgcgccgcggtggagcaggcgctggcaagc
ttcctcggcgagatcgaacaggtgccgccgatgcattcggcgctgaagaaggacggccgc
ccgctgtatgaatacgcgcgcgccggccagaccgtggagcgcgcggcgcgccgcgtcacc
atccgttcgattgcgctgctggactgcgccttgcccaatgccccgtcgttcacgatgcgg
gtgacgtgcagcaagggcacctatatccgcacgctggccgaggacatcggcgaagcgctg
ggctgtggcgcgcacttgaccggactgcgccgcatcgccgtgggcgacctgacgctggac
ggcgcggtgacgctggaacagatcgaacagcacgacgacgcgcagcgcccgaccatgctg
gcacctgtggacgccttgctgcagaagtgtgcgccggtgcatctggacgaggccgctgca
acgcgcttcctgcagggccagcgcattgcccagcgtgacctgccggccggcaccgggctg
gccgaggatgcgctggcgcgcgtctatgccggcgagccggcccggctgctgggcgtggcg
cgcatgcgcgaaggcgcgttgcggccggagcggctggtcaagctgtaa
DBGET
integrated database retrieval system
