Cupriavidus necator N-1: CNE_1c23000
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Entry
CNE_1c23000 CDS
T01564
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc03030
DNA replication
cnc03430
Mismatch repair
cnc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNE_1c23000 (dnaX)
03430 Mismatch repair
CNE_1c23000 (dnaX)
03440 Homologous recombination
CNE_1c23000 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnc03032
]
CNE_1c23000 (dnaX)
03400 DNA repair and recombination proteins [BR:
cnc03400
]
CNE_1c23000 (dnaX)
Enzymes [BR:
cnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNE_1c23000 (dnaX)
DNA replication proteins [BR:
cnc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CNE_1c23000 (dnaX)
DNA repair and recombination proteins [BR:
cnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CNE_1c23000 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_18
AAA_22
AAA_14
AAA_30
AAA_5
AAA_2
nSTAND3
TsaE
AAA_28
Herpes_Helicase
Mg_chelatase
AAA_19
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AEI77633
UniProt:
G0F0K4
LinkDB
All DBs
Position
1:complement(2379881..2382217)
Genome browser
AA seq
778 aa
AA seq
DB search
MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
ALNCIGPDGNGGITAQPCGQCKACQEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAVYAP
TSGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVSHLDHILAQEGIAHDGNALRLLAQAAHGSMRDALSLTDQAIAYSAGQVSED
AVRGMLGAIDQGYLVQLLDALAAEDGAAMLAIADAMADRSLSFAGALQDLGSLLHKVALA
QAVPASVQDEWPEADEVRRLAGVFDAQEVQLFYQIANLGRSELALAPDEYAGFTMTLLRM
LAFRPSSEPATTQGQGGGAAPARQRGAAVLETAPPVDTRYAAAGANAAAQANAGTAAAPV
PAPVPARAVLPAPMAEAAAAPAAVAASPEAAPARPAAAAGNGAMSPAAAALAAARQGSAA
RGGGRKAPPPAMPPAPAAAQRPPAQPLRAPGAAAVSRPPAPVAKAPMQPPVQSPAAPARP
AAQPAARQAEPESVPPWELAGGSDVPPWEELPPDLPVIGPYDSDPGYRDSGFNEPAPPAA
APRNGPARPGRAPAREAEPAREAAPVPSATAPAESAKFVAPRPPAAGEDGTPPAFTGEWP
VLAAGLPLKGLAQQLAYQSELTQVVGRTFHLRIPVAALGENGVSERLQQALCDHFGVPVR
VVCEVGGVSITAAAADAEARAERQRQAEAVIEADPFVQGLLRDFGGQIVPGSIQPRAA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagttctagcgcgcaaatggcgccccagggatttcaccacgctggtcggc
caggagcacgtggtccgcgcgctcacgcacgcgctggaacagcagcggctgcaccatgcc
tacctgttcaccggcacgcgcggggtcggcaagaccacgctgtcgcggatcctggccaag
gccctgaactgcatcggccctgacggcaacggcggcatcaccgcccagccgtgcgggcag
tgcaaggcctgccaggagatcgacagcggccgcttcgtcgactacatcgagatggacgcc
gcctccaaccgcggcgtcgacgagatggcgcagttgctggacaaggcggtctacgccccg
acctccgggcgcttcaaggtctacatgatcgacgaagtgcacatgctgaccaaccacgcc
ttcaacgccatgctgaagacgctggaggagccacccgggcacgtcaagttcatcctcgcc
accaccgatccgcagaagatcccggtcacggtgctgtcgcgctgcctgcagttcaacctc
aagcagatgccgccggggcatatcgtctcgcacctggaccatatcctggcgcaggaaggc
attgcccacgacggcaacgcgctgcggctactggcccaggccgcgcacggctcgatgcgc
gacgcgctgtcgctgaccgaccaagccatcgcctacagcgcgggccaggtgtcggaagac
gcggtgcgcggcatgctgggcgcgatcgaccagggctacctggtgcagctgctcgatgcg
ctggccgccgaggacggcgccgccatgctggcgattgccgatgccatggccgaccgcagc
ctgtcgtttgccggcgcgctgcaggacctgggctcgctgctgcacaaggtggcgctggcg
caggccgtgccggcctcggtgcaggacgaatggcccgaagccgatgaggtgcggcgcctg
gccggcgtgttcgacgcgcaggaagtgcagctgttctaccagatcgccaacctcggccgc
agcgagctggcgctcgcgccggacgagtacgccggcttcaccatgacgctgctgcgcatg
ctggcgttccggccgtcgtctgaacccgccacgacgcaagggcagggcggtggtgccgcg
cctgcgcgtcagcgcggcgctgccgtgcttgagaccgccccgcccgttgatacccgctat
gcggcggctggtgccaacgccgccgcgcaggcaaatgccggtactgcggcggcgcctgtc
cctgcccctgtgcccgcacgggcggtactgcctgcgcccatggccgaagctgcggcagcg
cctgccgcagttgctgcatcccctgaagcagcgccagcgcgcccggccgcagccgccggc
aacggggccatgtcgcccgccgccgccgcgctggccgctgcccgccagggttccgctgct
cgtggtggcggccgcaaggcgccgccgccggccatgccgccagcgccggctgccgcgcag
cgcccgccggcccaacccttgcgcgcgcccggcgccgcagccgtaagccgcccgccggca
ccggttgcgaaggcgcccatgcagccgccagtccagtctccggcagcgccggcacggccc
gccgcgcagcccgcggcgcgccaggcggagccggaatccgtgccgccctgggagttggcg
ggtggcagcgacgtgccgccgtgggaagagctgccgcctgacctgccggtcataggcccc
tatgacagcgatcctggctaccgcgacagcggtttcaacgaaccggcaccgcctgccgcc
gcgccgcgcaacggcccggcccggccgggccgggcacccgcgcgcgaggccgagccggcg
cgcgaggccgctcccgtgccgtcagccacggcgccggcagagtccgccaaattcgtcgcc
ccgcgaccgcctgcggcgggcgaggatggcaccccgccggccttcaccggcgaatggccg
gtgctggccgctggcctgcccttgaagggcctggcacagcagctggcctaccagagcgaa
ctgacccaggtggtcgggcgcaccttccacctgcgcatcccggtcgcggccctgggcgag
aacggcgtgtccgagcggctgcagcaggcgctgtgcgaccactttggcgtgccggtgcgc
gtggtctgcgaggtgggcggggtttccatcaccgcggcggccgccgatgccgaggcgcgc
gccgagcgccagcgccaggccgaggcagtgatcgaggccgatccctttgtacagggcctg
ctgcgcgattttggcggccagatcgtgccgggctcgatccagccgcgcgccgcctga
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