Cupriavidus necator N-1: CNE_1c26150
Help
Entry
CNE_1c26150 CDS
T01564
Symbol
rhlE3
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNE_1c26150 (rhlE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnc03019
]
CNE_1c26150 (rhlE3)
Enzymes [BR:
cnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNE_1c26150 (rhlE3)
Messenger RNA biogenesis [BR:
cnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CNE_1c26150 (rhlE3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Fe-ADH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEI77931
UniProt:
G0ESC1
LinkDB
All DBs
Position
1:complement(2699389..2700951)
Genome browser
AA seq
520 aa
AA seq
DB search
MSSRRVSVCAGFASRQTPIPMTTTNAPEATTAGQTAVQTFDSFGLDARILRALSEQGYTT
PTPIQAQAIPVVLIGKDMMGAAQTGTGKTAGFALPIIQRLLPLANASASPARHPVRALML
TPTRELADQVYDNVARYAKHTDLRSTVVFGGVDMNPQTDALRRGVEILVATPGRLLDHVQ
QKSVNLSQVQMLVLDEADRMLDMGFLPDLQRIINLLPAHRQTLLFSATFSPEIKRLASSY
LKHPVTIEVARSNSTNENVRQMVYLVEDGHKQAAVVHLLKQRAEQGLSRQCIVFVNSKIG
CSRLARHLEREGINAAAIHGDKTQTERMQTLEGFKSGTIDALVATDVAARGLDIPDMPCV
VNFDVPYSAEDYVHRIGRTGRAGASGDALSIYVPGNDERLLSDIEKLIKRSIPRGKLEGF
DPTGERARQGDTERRRERSDVRRARGNGEGEERPRRHEHSANRQVFRASDDPFFSRPYEP
SAASVAQAKAADEVAAALSRGRQAPKRPVAALLGGVPRKS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagttccagacgcgtatccgtttgtgccgggttcgcctcccgccagacaccgataccc
atgaccactacgaacgcaccagaagccactaccgcggggcagaccgccgtgcagacattc
gacagcttcggcctggacgcgcgcatcctgcgcgccttgtccgagcagggctacaccacg
cccaccccgatccaggcacaggccatcccggtcgtgctgataggcaaggacatgatgggc
gccgcgcagaccggcaccggcaagaccgcgggcttcgcgctgccgatcatccagcgcctg
ctgccgctggccaatgctagcgcctcgccggcacgccacccggtgcgcgcgctgatgctg
acgcccacacgcgagctggccgaccaggtctacgacaacgtcgcgcgctacgccaagcac
accgacctgcgcagtaccgtggtgtttggcggcgtggacatgaacccgcagaccgatgcg
ctgcgccgcggcgtggaaatcctcgttgccacgcccggccgcctgctggaccacgtgcag
cagaagtcggtcaacctgtcgcaggtgcagatgctggtgctggacgaagccgaccgcatg
ctcgacatgggcttcctgccggacctgcagcgcatcatcaacctgctgccggcgcatcgc
cagacgctgctgttctcggccacgttctcgccggaaatcaagcggctggcctccagctac
ctgaagcacccggtcaccattgaagtggcgcgcagcaactcgaccaacgagaacgtgcgc
cagatggtgtacctggtcgaagacggccacaagcaggcagcggtcgtgcacctgctcaag
cagcgcgccgagcaggggctgtcgcgccagtgcatcgtcttcgtcaacagcaagatcggc
tgctcgcgcttggcgcgccacctggagcgcgagggcatcaacgccgccgccatccacggc
gacaagacccagaccgagcgcatgcagacgctggaaggcttcaagagcggcaccatcgac
gcgctggtcgccaccgacgtggccgcgcgcgggctcgatatccccgacatgccgtgcgtg
gttaatttcgacgtgccgtacagcgccgaagactatgtgcaccgcatcggccgtaccggc
cgtgccggcgccagcggcgatgcgctgtcgatctacgtgccgggcaatgacgagcgcttg
ctgtcagatatcgagaagctgatcaagcgcagcatcccgcgcggcaagctggaaggcttc
gacccgaccggcgagcgcgcccgccagggcgacaccgagcgccgccgcgagcgtagtgac
gtgcgccgcgcgcgcggcaacggcgagggcgaagagcgtccgcgccgccacgagcacagc
gccaaccgccaggtgttccgtgcctcggatgatccgttcttctcgcgcccgtacgagccc
agcgccgccagtgtcgcccaggccaaggcggccgatgaagtggccgctgcgctgagccgt
ggccgccaggcgcccaagcggccggtggctgccctgctgggtggcgtgccgcgcaagtcc
tga
DBGET
integrated database retrieval system
