Cupriavidus necator N-1: CNE_1c28970
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Entry
CNE_1c28970 CDS
T01564
Symbol
lcfA3
Name
(GenBank) long-chain-fatty-acid--CoA ligase LcfA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc00061
Fatty acid biosynthesis
cnc00071
Fatty acid degradation
cnc01100
Metabolic pathways
cnc01212
Fatty acid metabolism
cnc02024
Quorum sensing
cnc04146
Peroxisome
Module
cnc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CNE_1c28970 (lcfA3)
00071 Fatty acid degradation
CNE_1c28970 (lcfA3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CNE_1c28970 (lcfA3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CNE_1c28970 (lcfA3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cnc01004
]
CNE_1c28970 (lcfA3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnc04147
]
CNE_1c28970 (lcfA3)
Enzymes [BR:
cnc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CNE_1c28970 (lcfA3)
Lipid biosynthesis proteins [BR:
cnc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CNE_1c28970 (lcfA3)
Exosome [BR:
cnc04147
]
Exosomal proteins
Exosomal proteins of breast milk
CNE_1c28970 (lcfA3)
Exosomal proteins of breast cancer cells
CNE_1c28970 (lcfA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEI78210
UniProt:
G0EUG3
LinkDB
All DBs
Position
1:3009591..3011324
Genome browser
AA seq
577 aa
AA seq
DB search
MNEQAFFEDLEVRHRKIWPAGLPDAPVYPHGEAPLGDYLRAWARKRPDHAALVWYGTTVS
YAELDDLSERCAALLKGRGVGAGDRVAVMMGNCPQFHVVFYGILKLGAVYVPVNPLFKEQ
ELVYELNDAGATTVIVQDQLALLLMSVRAQTLLHTVYTTSAGAMLPAQPDLPLPAGLDAP
PLAVEGAIDLLQALRDTEPVAQPPADMDTLAALNYTGGTTGLPKGCMHTQRDMVYTAAAS
YALTGGVDAERLAEGSGDVMLNFLPMFWIAGENLGLIYPIFSGATVVLLARWDPVAVMAA
IERYRVNRTFVVVDNAVELMNHPECGRYDLRSLQHTRAASFIRKITPDIRQRWHALTGSI
IAEGAWGMTETHTSDTFTTGMQDDDMDLRGRPVFVGLPVPGTRIKICDFDTGAVLPVGEE
GEIVVSTPSLFKGYWGRPDVDAEVFRDGWFRTGDIGAYDEAGYLHFLGRRKEMLKVRGMS
VFPSELEVLLSRHPAVLGSAVVGRPDPDKGQVPVAFIRLRPEHADGITADTLHAWCREQM
AVYKVPEIRILPEFPLTATGKVRKVELQALLDTEAGG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacaggcgttcttcgaggacctggaagtccggcatcgcaagatctggcccgcc
ggcctgcccgacgcaccggtctacccccatggcgaggccccgctgggcgactacctgcgc
gcgtgggcgcgcaagcgcccggaccacgccgcgctggtctggtacggcaccaccgtgagc
tacgccgagctcgacgacctgtccgagcgctgcgccgcgctgctcaagggccgcggcgtg
ggtgcgggcgaccgggtggcggtgatgatgggcaactgcccgcagttccacgtggtcttc
tacggcatcctgaagctgggcgcggtgtatgtgccggtcaacccgctcttcaaggaacag
gagctggtctatgagctgaacgatgccggcgccaccaccgtcatcgtgcaggaccagctg
gcgctgctgctgatgtcagtgcgcgcgcagacgctgctgcatactgtctacaccaccagt
gccggcgcgatgctgccggcgcagccggacctgccgctgccagcgggcctcgacgcgccc
ccgctggccgtggaaggcgccatcgacctgctgcaggcgctgcgcgacaccgagccggtc
gcacagcccccggccgacatggacacgctggccgcactgaactacaccggcggcaccacc
ggcctgcccaagggctgcatgcacacgcagcgcgacatggtctacaccgcggcggcttcc
tacgcgctcaccggcggtgtcgatgcggaacggctggcagaaggctccggcgacgtgatg
ctgaacttcctgccgatgttctggatcgcgggcgagaacctcgggctgatctacccgatc
ttcagcggcgcgacggtggtgctgctggcgcgctgggacccggtcgcggtgatggccgcg
atcgagcgctatcgtgtcaaccgcaccttcgtggtggtggacaacgcggtcgagctgatg
aaccaccccgaatgcggccgctacgacctgcgttcgctgcagcacacgcgcgccgcctcg
ttcatccgcaagatcacccccgacatccgccagcgctggcacgcgctgaccggcagcatc
attgccgaaggcgcctggggcatgaccgagacccataccagcgacaccttcaccaccggc
atgcaggacgacgatatggacctgcgcggccgcccggtgtttgtcggcctgccggtgccg
ggcacgcgcatcaagatctgcgacttcgacaccggcgcggtgctgccggtcggcgaggaa
ggcgagatcgtggtcagcacgccgtcgctgttcaagggctactggggccgccccgacgtg
gatgctgaggtgttccgcgacggctggttccgcaccggcgatatcggcgcctatgacgag
gcgggctacctgcatttcctgggacgacgcaaggagatgctcaaggtgcgcggcatgagc
gtgttcccgtccgagctggaggtgctgctgtcacgccatccggcggtgctgggctcggcc
gtggtgggccgccccgacccggacaagggccaggtcccggtggcctttatccgcctgcgc
cccgagcatgccgacggcatcactgccgacacgctgcatgcatggtgccgcgagcagatg
gcggtctacaaggtgcccgagatccgcatcctgcccgagttcccgctgaccgccaccggc
aaggtgcgcaaggtcgagctgcaggccttgctggataccgaggccggcggctga
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