Cupriavidus necator N-1: CNE_1c30370
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Entry
CNE_1c30370 CDS
T01564
Symbol
pcnB
Name
(GenBank) poly(A) polymerase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNE_1c30370 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnc03019
]
CNE_1c30370 (pcnB)
Enzymes [BR:
cnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CNE_1c30370 (pcnB)
Messenger RNA biogenesis [BR:
cnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CNE_1c30370 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
ASXH
TruB_C
DUF2204
Motif
Other DBs
NCBI-ProteinID:
AEI78349
UniProt:
G0EVS1
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All DBs
Position
1:3160551..3162092
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AA seq
513 aa
AA seq
DB search
MIKKLITRLLGKPGPKLRRTGHAHTPRIVGADEHQIDPALLSRNAVKVTSTLQQAGYQAY
IVGGAVRDLLLGIKPKDFDVATNATPDQVQALFRRSRIIGRRFQIVHVTFYGGREQEIIE
VSTFRALVDAIASETLPEGRRLKRAELDSKTHAIDASGRVLRDNVWGSQAEDAERRDFTI
NAMYYDPAAQTVHDYHHGMEDIRARTLRMIGDPVTRYREDPIRMLRVVRFAAKTGFDIDE
ATRHPIAGLASLIHNVPSARLFDEMLKLLMSGHAWASLQELRKAGLHQGLLPLLDVALEQ
PMGQRFVQLALDNTDRRVQAGKPVSPGFLFAALLWHHVLQRWTRLREEGEHAIAALNTAM
DMVLEKQTGQLAIQRRFVTDMRDIWGMQPRFEKRVGRMPFRLLESPRFRAGFDFLHLRCQ
SGELPEELAAWWQDFQDADPGEREDLIDAVRGARGPSGQGGQGSQGGQGAEGEGPARKKR
RRRGPRKSDKVSSRSDTDAGEAAHAGPGQPEET
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaagctaattacccggctgctgggcaaacccggccccaagctgcgccgcacc
ggccatgcccatacgccgcgcattgtcggcgccgacgaacaccagatcgaccccgcgctg
ctgtcgcgcaatgccgtcaaggtcacctccacgctgcagcaggccggctaccaggcctac
atcgtgggcggcgcggtgcgcgacctgctgctcggcatcaagcccaaggatttcgacgtc
gcgaccaacgccacgcccgaccaggtgcaggcgctgttccggcgctcgcgcatcatcggg
cggcgcttccagatcgtgcacgtgaccttctacggtgggcgcgagcaggaaatcatcgag
gtctcgaccttccgcgcgctggtcgacgccatcgccagcgagaccctgcccgaaggccgc
cgcctgaagcgcgccgagctcgacagcaagacccatgcgatcgatgcctcgggccgggtg
ctgcgcgacaacgtgtggggttcgcaggccgaagacgcggaacgccgcgacttcaccatc
aatgcgatgtactacgacccggccgcgcagaccgtgcatgactaccatcacggcatggaa
gacatccgcgcgcgcacgctgcgcatgattggcgacccggtcacgcgctatcgcgaagac
ccgatccggatgctgcgcgttgtgcgcttcgccgccaagaccggcttcgacatcgacgaa
gccacgcgccacccgatcgccggcctggcctcgctgatccacaacgtgcccagcgcgcgc
ctgttcgacgagatgctcaagctgctgatgtccggccacgcctgggcctcgctgcaggag
ctgcgcaaggccgggctgcaccagggcctgctgccgctgctggacgtggcgctggagcag
cccatgggccagcgcttcgtgcagctggcgctggacaacaccgaccgccgcgtgcaggcc
ggcaagccggtctcgccgggcttcctgttcgccgcgctgctgtggcatcacgtgctgcag
cgctggaccaggctgcgcgaggaaggcgagcacgccatcgccgcgctgaacaccgccatg
gacatggtgctggaaaagcagaccggccagctggcgatccagcgccgctttgtcaccgac
atgcgcgatatctggggcatgcagccgcgctttgaaaagcgcgtgggccgcatgccgttc
cggctgctggaatcgccgcgcttccgtgccggcttcgacttcctgcacctgcgctgccag
tcgggcgagctgcccgaggaactggccgcctggtggcaggacttccaggacgccgacccg
ggcgagcgcgaggacctgatcgacgcggtacgcggcgcgcgcggcccgagcggtcaaggc
ggccagggcagtcaaggtggccagggcgccgagggcgaaggcccggcacgcaagaagcgc
cgccggcgcggtccgcggaaatcggataaagtgtcttcccggagcgacacggacgcgggc
gaggcagcacatgccggccccggccagccggaggaaacctaa
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