Cupriavidus necator N-1: CNE_1c30940
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Entry
CNE_1c30940 CDS
T01564
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc03030
DNA replication
cnc03430
Mismatch repair
cnc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNE_1c30940 (holA)
03430 Mismatch repair
CNE_1c30940 (holA)
03440 Homologous recombination
CNE_1c30940 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnc03032
]
CNE_1c30940 (holA)
03400 DNA repair and recombination proteins [BR:
cnc03400
]
CNE_1c30940 (holA)
Enzymes [BR:
cnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNE_1c30940 (holA)
DNA replication proteins [BR:
cnc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CNE_1c30940 (holA)
DNA repair and recombination proteins [BR:
cnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CNE_1c30940 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AEI78406
UniProt:
G0EVX8
LinkDB
All DBs
Position
1:complement(3220204..3221262)
Genome browser
AA seq
352 aa
AA seq
DB search
MQLKLDGLDAHLRQAKAKGLAPLYVVHGDEHLLVLEAVDRLRAAAREAGFSERDVLVAER
GFHWGQLVEAQQSMSLFGDRKIVELRIPSGKPGKDGGEALRAVAAQPSPDVVLLVTLPRL
DFAASKSAWFQALEGAGVSIKVDSVDRTRLPAWVGERLSLQQQRVEGGEPGRRSLQFIAD
KVEGNLLAAHQEIQKLGLLYPPGELTFDQVHDAVLNVARYDVFKLSESMLSGDVPRLVRM
LEGLRGEGEATVLVLWALTEEIRVLSKVRQGLAAGKPAGVLMRELRVWGPRERLVPQAAQ
RLAQPRLDAALALAARLDRQVKGLSDLPPPGGSPLPAEPWDGLQQLALMIAR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaagctcgacgggctcgacgcacacctgcggcaggcgaaggccaagggcctg
gcgccgctgtacgtggtgcacggcgacgaacacctgctggtgctggaggccgtcgaccgc
ctgcgcgccgcggcgcgcgaagccggcttctccgagcgcgacgtgctggtggccgagcgc
ggcttccactggggccagctggtcgaggcgcagcagtcgatgtcgctattcggcgaccgc
aagatcgttgaactccgcatcccgtcgggcaagcccggcaaggacggcggcgaggcgctg
cgcgccgtggccgcccagccgtcgcccgacgtggtgctgctggtgacgctgccgcggctg
gattttgccgcgtccaagtcggcctggttccaggcgctggaaggcgccggcgtgtcgatc
aaggtcgactccgtggaccgcacccggctgccggcctgggtcggcgagcggctatcgctg
cagcagcagcgcgtcgagggcggcgagcctggccggcgttcgctgcagtttatcgccgac
aaggtcgagggcaacctgctggcggcgcaccaggaaatccagaagctggggctgttgtac
ccgcccggcgaactcaccttcgaccaggtgcacgatgcggtactgaacgtggcccgctac
gacgtcttcaagctgtctgaatcgatgctttctggcgacgtgccgcggctggtgcgcatg
ctcgaagggctgcgcggcgagggcgaggccacagtgctggtgctgtgggcgctgaccgag
gaaattcgcgtattatccaaggtccggcaagggctggcggccggcaagccggcgggcgtg
ctgatgcgcgagctgcgcgtctggggcccgcgcgagcggctggtgccgcaggccgcgcag
cgcctggcgcagccaaggctggacgcggcgctggcgctggcggcgcggctggaccgccag
gtcaagggcctgtcggacctgccgccaccgggcggcagcccgctgccggcggaaccatgg
gacgggctgcagcagcttgccctgatgatcgcgcgctga
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