Cupriavidus necator N-1: CNE_2c01930
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Entry
CNE_2c01930 CDS
T01564
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc00100
Steroid biosynthesis
cnc00909
Sesquiterpenoid and triterpenoid biosynthesis
cnc01100
Metabolic pathways
cnc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
CNE_2c01930
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
CNE_2c01930
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cnc01006
]
CNE_2c01930
Enzymes [BR:
cnc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
CNE_2c01930
Prenyltransferases [BR:
cnc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
CNE_2c01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AEI79179
UniProt:
F8GP17
LinkDB
All DBs
Position
2:complement(217072..218118)
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AA seq
348 aa
AA seq
DB search
MRDPSRAFLLGPLLKGVSRSFYLTLRVLPVHMRDPVGLAYLLARAADTIADTSLIPPQRR
LTLLLSLRDQVNGATADSALADSIATEVAGRQEQSDERILLQSLGPALALLAQLEPDDQQ
AVRQIVSTLTEGMEFDLRTFPDEHAGRIVALGEPEALDRYTYLVAGCVGEFWTSMTAAHV
PGAIRVPDAMLRRGVRFGKALQMTNVLRDCGKDLRIGRCYLPATMLHQHGLSPQDLLLPD
ASLRARALMLELVHDTLDHFHEAMAYTLAIPPHFIRLRLACLWPVLIGMETLLLLVRNDD
WLDPAKTSRLQRSKVYRIIACSLPMVPSNSLLRIWFARQMRNIDAVIR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaccccagccgggcgttcctcctcggtccgctgctcaaaggcgtctcgcgttcg
ttctatctgacgctgcgcgtgctgcctgtccatatgcgcgatccggtcggcctggcctat
ctgctggcgcgcgccgccgacacgattgccgatacctcgctgatcccgccacaacggcgg
ctgacgctgctgttgtcgttgcgcgaccaggtcaacggtgccacagcagactcagcgctg
gccgacagcatcgcaaccgaggtggcaggccggcaggaacagtcggatgagcgcatcctg
ctccagtcactgggccccgcgctggcgctgctggcgcagctggagccggacgaccagcaa
gcggtacggcagatcgtgtcgaccctgaccgagggcatggaattcgacctgcgaacgttc
cccgatgaacacgccggccgcatcgtcgcgcttggcgaaccggaagcgcttgaccgttac
acgtacctggtcgccggatgcgtcggcgaattctggaccagcatgactgccgcccatgtg
cccggcgcaatccgcgtgcccgacgccatgctgcgccgcggggtccgcttcgggaaggcc
ttgcagatgaccaatgtcctgcgggactgcggcaaggacctgcgcatcgggcgctgctat
cttccggcgacgatgctgcaccagcatggcttgagcccgcaggatctcctgctcccggac
gcctcgctgcgcgcgcgggccttgatgctcgaactcgtgcacgacacgctggaccacttt
cacgaggcgatggcctacacgcttgccattcccccgcactttatccggctgcggctggct
tgcctgtggcccgtccttatcggcatggagaccctgctgctcctggtgcgcaacgacgac
tggctggacccggcaaagacatcccggctgcagcgcagcaaggtatatcggatcattgcg
tgttcgctgccgatggtgccgtcgaacagcctgttgcgcatctggtttgcgcgccagatg
cgcaacatcgatgctgtcattcgctga
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