Cupriavidus necator N-1: CNE_2c08580
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Entry
CNE_2c08580 CDS
T01564
Symbol
lcfB4
Name
(GenBank) long-chain-fatty-acid--CoA ligase LcfB
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc00061
Fatty acid biosynthesis
cnc00071
Fatty acid degradation
cnc01100
Metabolic pathways
cnc01212
Fatty acid metabolism
cnc02024
Quorum sensing
cnc04146
Peroxisome
Module
cnc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CNE_2c08580 (lcfB4)
00071 Fatty acid degradation
CNE_2c08580 (lcfB4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CNE_2c08580 (lcfB4)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CNE_2c08580 (lcfB4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cnc01004
]
CNE_2c08580 (lcfB4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnc04147
]
CNE_2c08580 (lcfB4)
Enzymes [BR:
cnc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CNE_2c08580 (lcfB4)
Lipid biosynthesis proteins [BR:
cnc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CNE_2c08580 (lcfB4)
Exosome [BR:
cnc04147
]
Exosomal proteins
Exosomal proteins of breast milk
CNE_2c08580 (lcfB4)
Exosomal proteins of breast cancer cells
CNE_2c08580 (lcfB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AEI79829
UniProt:
F8GSR0
LinkDB
All DBs
Position
2:918768..920309
Genome browser
AA seq
513 aa
AA seq
DB search
MDQAMLIGIERWAAEKPDDVALVEGERSLTWAAFNEVANRVAHGLRERGVGAGDIVVLRT
QVRLEWAIVAGALAKLGSTMLGLNWRLTPEESRHVLADSRATVFLCDDVDPSALKPLLDA
LPIKLAISIDAPADGFLPYSVLLESSDVPLHAQAEPPLIIYTSGTTGLPKGVTMHRGTDP
QTMREYRESVEAYRGGAGESVSLINMPAHHGSGPSQFWACVRRGGKTVLQRRFLPEETLQ
LIARHKVTTWTGVPTMYKRLAALPAEVLARYDVSSIRGLSIGAAPVPYGLKEWILGYFGA
DTLQEGYGASEVGMISRLPPEMQRIKPGSSGKPHRHVIVQVRDAQGHCLPAGQRGELWIR
TPVTIRNYLNAPPLGPDTVDAEGFFRVGDVGYLDEDGYIFITDRAKDMIISGGVNIYPAE
IEAALLRHPSILDAAVIGIPDDEFGEQVLAFCELKPGHRVGEHEVLAHCAEHLASYKRPR
RIEFMQELPRNTMGKLLKRELRDPYWKGQERHV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagcaatgctgattggaatcgaacgatgggcggcggaaaaacccgacgatgtc
gccctggtcgaaggagagcgcagcctgacctgggcggcgtttaacgaggtagccaaccgc
gtcgcgcatggattgcgggaacgcggggtcggtgccggcgacatcgtcgtgctgcgcacc
caggtgcggctcgaatgggccatcgttgccggtgcgctagccaagctgggcagcacgatg
ctcgggctgaactggcggctgacaccggaagaaagccgccacgtgctggctgacagcagg
gcaacggtgttcctttgcgacgatgtcgatccgtccgcgttgaagcccttgctggatgcg
ttgcccatcaagcttgccatctcgatcgacgcgcccgccgacggattcctgccatacagc
gtcttgctcgaaagtagcgatgtaccactccatgcgcaggccgagcccccgctgatcatc
tacacctcaggcaccaccgggctgcccaagggggtgacgatgcatcgcggcaccgatccc
cagacgatgcgcgagtaccgcgagtccgtggaggcctaccgcggcggcgccggcgagagc
gtcagcctgatcaacatgccggcccaccacggttccggcccgtcccagttctgggcgtgc
gtgcgtcgtggcggcaagaccgtactgcagcggcgcttcctgccggaagagacgctgcaa
ctgattgcccgccacaaggtcactacctggaccggcgtgcccaccatgtacaagcgcctg
gcggcgctgcctgccgaagtgctggcccgctacgatgtctcgtcgatccgtggcctcagc
atcggggccgctcccgtgccctacgggctgaaggaatggattctcggctacttcggcgcc
gataccctgcaggaaggctacggcgccagcgaggtcggcatgatttcccggctgccgcca
gagatgcagcgcatcaagccgggttccagcggcaagccgcaccggcatgtcatcgtgcag
gtccgggacgcgcaaggacattgcctgccggcaggccagcgcggcgaactgtggatccgc
acgccggtgaccatccgcaactacctgaatgcgccgccgctcggccccgacacggttgac
gccgagggcttcttccgcgtcggcgatgtcggctatctcgatgaggacgggtacatcttc
atcaccgaccgcgccaaggacatgatcatttccggcggcgtgaacatctatccggccgag
atcgaggcggcgctgctgaggcatccctccatcctggacgccgcggtgatcgggatcccc
gacgacgagttcggcgagcaggtgcttgccttctgcgaactcaagcccggccatcgcgtc
ggcgagcatgaggtgctggcccactgcgcggagcatctcgcttcgtacaagcggccgcgc
cgtatcgaattcatgcaggaattgccgcgcaacaccatgggcaagctcctgaagcgcgaa
ctgcgggatccctattggaaaggacaggagcggcacgtatga
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