Cupriavidus necator N-1: CNE_BB1p04460
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Entry
CNE_BB1p04460 CDS
T01564
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc03030
DNA replication
cnc03430
Mismatch repair
cnc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNE_BB1p04460 (dnaQ)
03430 Mismatch repair
CNE_BB1p04460 (dnaQ)
03440 Homologous recombination
CNE_BB1p04460 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnc03032
]
CNE_BB1p04460 (dnaQ)
03400 DNA repair and recombination proteins [BR:
cnc03400
]
CNE_BB1p04460 (dnaQ)
Enzymes [BR:
cnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNE_BB1p04460 (dnaQ)
DNA replication proteins [BR:
cnc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CNE_BB1p04460 (dnaQ)
DNA repair and recombination proteins [BR:
cnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CNE_BB1p04460 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
PAS_10
PAS_9
PAS_7
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AEI81870
UniProt:
F8GX00
LinkDB
All DBs
Position
BB1p:460153..462315
Genome browser
AA seq
720 aa
AA seq
DB search
MIQKWIAQHRFGVTLALLFLVQLLVVGAMLLPLAIDLPAAQRAWLTALVLQRGALWIALA
ALLLLALGVGLKALFNAYPTPVTRLAEDAALLAANPGHRIEPQGARGVRSLGEALNLLAA
SHQTLHDGVQQKIELANRALAEEKNRLAALMAELSLSVLVCNIEGQILLYNDSARQLLEA
GRGGAPAAGTAAIGLGRSVFGAIERGLILHALEQIQQQLRENEDGAARPVSGFVATLAQG
QIVRAQMAPVFDSAHTLNGFVLTLEDITRNVEADSRRDALLQSLTQDARATLASIRTAVE
AIQAYPEMSAEKRTQLTSIIDDESQRLVYQIDRAVDQRGAGMDSRQELEEMRGADLLALL
VRRIGSPSLSVTASDTVDATLWLKVDSYALTQALAYLAQRLATEASVTELRFGLHRAGRL
AYLDLTWRGTPLTADTLRVWENAPLPITAAGAALSLSALIARQGGEAVCSAGASPDVARY
RLMLPLSEPGPALDIPPAQEGRPEFYDFDLFHRPGQSAEADQCLLSQLNFTVFDTETTGL
DPAAGDEIISIGALRIVNGRLLQRESFDQLIQPRGALSAGSIAIHGITQAMLNGQPPIET
VLPQFHRFAADTVLVAHNAAFDMKFLQMLEARTGTAFTQPVLDTLLLSQVIHPHQAEHTL
EAIAGRFGVAIIGRHTALGDAIVTGEVFLKMTPLLAEKGIFTLKEARDAAQQTHYARIRY
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaaagtggatcgcgcaacaccgctttggcgttacgttggcgctgctcttcctg
gtgcagctgcttgtcgtcggcgcgatgctcctgccgcttgcgatcgatctgccggcggcg
cagcgcgcatggttgaccgcgctggtgttgcagcgcggtgcgctgtggatcgcgctggcg
gcactgctgctgctggccttgggcgtcggcctgaaggcgttgttcaacgcttacccgacg
ccggtcacgcgcctggccgaagacgccgcgctgcttgcggccaaccctggccaccgcatc
gagccacagggcgcgcgcggcgtgcgcagcctcggagaagcgctcaacctgctggcagct
tcccaccagacgctgcacgacggcgtgcagcagaaaatcgagctggcgaaccgcgcgctg
gccgaggaaaagaaccggctcgccgcgctcatggcggagctttccttgagcgtgctggtc
tgcaatatcgaagggcaaatactgctctacaacgacagcgccaggcagttgctcgaagcc
gggcggggcggcgcgcctgcggccggcacggcggcaatcgggctgggccgctctgtgttc
ggcgcgatcgaacgtgggcttatcctgcatgcgctggagcagatccagcagcaacttcgg
gagaacgaggacggcgcggcgagaccggtatccggatttgtcgccacgctcgcgcagggc
cagatcgtgcgcgcgcagatggcgccggtgttcgacagcgcacacaccctcaatggcttc
gtgctgacgttggaagacatcacccgcaacgtcgaggccgacagccgccgcgacgcgttg
ctgcagtcgctcacgcaagatgcgcgcgccacgctggcgagtatccgtacggcggtggaa
gccatccaggcgtacccggaaatgagcgctgagaagcggactcagctcaccagcatcatc
gacgacgaatcgcagcgcctggtgtaccagatcgaccgtgccgtggatcagcgcggcgcc
gggatggacagccgtcaggaactcgaagagatgcgcggcgccgatctgctcgcgctgctg
gtgcgacgaatcggcagcccctcgctcagcgtcaccgccagcgatacggtcgacgccacg
ttgtggctcaaggtggacagctacgccttgacccaggcgctggcctatcttgcgcagcgg
ctcgccaccgaagccagcgtcaccgagttgcgcttcgggctgcatcgtgccggccggctg
gcctatcttgatctcacctggcgcggcacgccgctgaccgccgacacgctgcgggtgtgg
gagaacgcgccgttgccgatcaccgcggccggcgcagcgctctcgctgagcgcactgatc
gcgcgtcaaggcggcgaggccgtgtgttccgccggggcgtcgcctgatgtcgctcgctat
cgtctgatgctgccgctgtccgagccggggccggcgctggacatcccgccggcacaggaa
ggccgcccggaattctacgatttcgacttgtttcacaggccgggacagagcgccgaggcc
gaccagtgcctgctctcgcaactcaatttcacggtgttcgataccgaaaccaccgggctg
gatcccgcagccggcgatgagatcatctccatcggtgccttgcgcatcgtcaatggccgg
ctgctgcagcgggaaagcttcgaccagctgatccagccgcgtggcgcgctgagcgccggg
tcgatcgcgattcacggcatcacgcaagccatgctcaatggccagccaccgatcgaaacg
gtactgccgcagttccaccgtttcgccgctgacaccgtgcttgtcgcgcacaatgccgcg
ttcgacatgaagttcttgcaaatgctggaggcaagaaccggcacggccttcacccagccg
gtcctcgatacgctgctgctatcgcaagtgatccacccccatcaggctgagcacacgctg
gaggcgatcgccggccgtttcggggtggcgatcatcggccgccataccgcgctgggcgac
gcgatcgtcaccggcgaggtttttctcaagatgacccccttgctcgcggaaaaaggcatc
ttcacgctgaaggaggcacgcgatgccgcgcaacagacccactatgcgcggatccggtac
tga
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