KEGG   Chitinophaga caseinilytica: WJU22_07415
Entry
WJU22_07415       CDS       T11999                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cnca  Chitinophaga caseinilytica
Pathway
cnca02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cnca00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    WJU22_07415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnca03021]
    WJU22_07415
Transcription machinery [BR:cnca03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WJU22_07415
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE DUF2774 DUF134 TnsD HTH_40 HTH_23 HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: WZN48000
UniProt: A0ABZ2Z6Y2
LinkDB
Position
complement(1730758..1731273)
AA seq 171 aa
MQLLREDEQQFMKALFQTYFALVCKSIYRLVPDMATAEDLAQEVFIKVWNRRGQLGEVFF
KAYLHRAAVNMALDHIDKHKRRGGPPQEIGPAAEEQQATAPVVHLAETQTRIRQAVDALP
EKCREVFVLSRYEEMSYKEIASAMQISIKTVENQMITALKKLRHSLREYLE
NT seq 516 nt   +upstreamnt  +downstreamnt
ttgcaactactacgggaagatgaacaacagttcatgaaagccctcttccagacctacttt
gcgctcgtgtgcaagtcgatttaccgccttgtgcccgatatggccaccgcggaagacctg
gcgcaggaagttttcatcaaggtctggaaccggcgcgggcagctgggggaggtcttcttc
aaggcttacctgcatcgcgcggcggtgaacatggcgctggaccatatagacaagcacaag
cgacggggcggccctccccaggaaatcgggccggcggcggaagaacagcaggctaccgcg
ccggtggtccacctcgctgaaacgcagacccgcatccggcaggcggtagacgccttgccg
gaaaagtgccgggaggtttttgtcctgagccggtacgaggaaatgagttacaaggaaatc
gcgagcgccatgcagatttccatcaaaacggttgaaaaccaaatgatcacggcgctaaaa
aaattgcgccattcgctcagggaatatttggaatga

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