Chitinophaga caseinilytica: WJU22_13740
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Entry
WJU22_13740 CDS
T11999
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cnca Chitinophaga caseinilytica
Pathway
cnca02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cnca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WJU22_13740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnca03021
]
WJU22_13740
Transcription machinery [BR:
cnca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WJU22_13740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_40
AAA_16
HTH_16
B12-binding_2
TnsD
Microp_apicomplexa
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WZN43961
UniProt:
A0ABZ2YZV8
LinkDB
All DBs
Position
complement(3356620..3357222)
Genome browser
AA seq
200 aa
AA seq
DB search
MSERKEEIGRGLLQAVAEGDEKAFSEIFHHYRNKVYAIAFKVTGSEAIAEEVLLDVFLKV
WLKREQLPQVTHFAAWLFTITRNHLFNLLKQTAHRTQPAPLADAEEYALYPASDNPAAIL
QEKEYRKVLQQAIDRLPPQQKKVYRLIKEHGLKREEAAVELNLSPETVKRHLSDAMQFIR
VYCVSHLGTWAALTIVKGIL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacgcaaagaagaaatcggacggggcttgctgcaggccgttgcggaaggcgat
gaaaaagcattcagcgagatattccatcattaccggaacaaggtgtacgccatcgctttt
aaagtgacaggctccgaagccatcgccgaagaggtgctgctcgatgtattcctgaaggtc
tggcttaaaagggaacaactcccgcaggtcacgcatttcgcggcctggctgttcaccatc
acccgcaaccatctcttcaacctcctcaaacaaaccgcgcatcgcacgcaacccgcgccg
ctggcggacgccgaggaatatgccttgtaccccgcgtcagacaatcccgccgccatactg
caggaaaaagaataccgcaaagtgctgcaacaggccatagaccgcctgccgccgcagcaa
aagaaagtataccgcctcatcaaggaacacggcctcaagcgcgaagaagccgccgtggag
ctcaacctttcccccgaaaccgtaaaacgccacctttccgacgccatgcagttcatccgc
gtatactgcgtatcgcacctgggcacctgggcggcgctcaccattgttaagggaatatta
tga
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