KEGG   Chitinophaga caseinilytica: WJU22_13740
Entry
WJU22_13740       CDS       T11999                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cnca  Chitinophaga caseinilytica
Pathway
cnca02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cnca00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    WJU22_13740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnca03021]
    WJU22_13740
Transcription machinery [BR:cnca03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WJU22_13740
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_40 AAA_16 HTH_16 B12-binding_2 TnsD Microp_apicomplexa HTH_28
Other DBs
NCBI-ProteinID: WZN43961
UniProt: A0ABZ2YZV8
LinkDB
Position
complement(3356620..3357222)
AA seq 200 aa
MSERKEEIGRGLLQAVAEGDEKAFSEIFHHYRNKVYAIAFKVTGSEAIAEEVLLDVFLKV
WLKREQLPQVTHFAAWLFTITRNHLFNLLKQTAHRTQPAPLADAEEYALYPASDNPAAIL
QEKEYRKVLQQAIDRLPPQQKKVYRLIKEHGLKREEAAVELNLSPETVKRHLSDAMQFIR
VYCVSHLGTWAALTIVKGIL
NT seq 603 nt   +upstreamnt  +downstreamnt
atgtctgaacgcaaagaagaaatcggacggggcttgctgcaggccgttgcggaaggcgat
gaaaaagcattcagcgagatattccatcattaccggaacaaggtgtacgccatcgctttt
aaagtgacaggctccgaagccatcgccgaagaggtgctgctcgatgtattcctgaaggtc
tggcttaaaagggaacaactcccgcaggtcacgcatttcgcggcctggctgttcaccatc
acccgcaaccatctcttcaacctcctcaaacaaaccgcgcatcgcacgcaacccgcgccg
ctggcggacgccgaggaatatgccttgtaccccgcgtcagacaatcccgccgccatactg
caggaaaaagaataccgcaaagtgctgcaacaggccatagaccgcctgccgccgcagcaa
aagaaagtataccgcctcatcaaggaacacggcctcaagcgcgaagaagccgccgtggag
ctcaacctttcccccgaaaccgtaaaacgccacctttccgacgccatgcagttcatccgc
gtatactgcgtatcgcacctgggcacctgggcggcgctcaccattgttaagggaatatta
tga

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