Chitinophaga caseinilytica: WJU22_14045
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Entry
WJU22_14045 CDS
T11999
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cnca Chitinophaga caseinilytica
Pathway
cnca02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cnca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WJU22_14045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnca03021
]
WJU22_14045
Transcription machinery [BR:
cnca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WJU22_14045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HMD
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
WZN44020
UniProt:
A0ABZ2YWU3
LinkDB
All DBs
Position
3445932..3446507
Genome browser
AA seq
191 aa
AA seq
DB search
MENTQLSEISKRIENDDENAFREIYDLFYFDLVAFSRQIVLDDAAAEDAVENVFIRLWQN
RKTLGNINNLSAYLYTAAKYASINYLKARKNVSDVSIEDLDDQSLYSFSTPETSMIGKEE
VLTIEKAINQLPPKSKLVFYLVKEKGLNCREVAKILNSSVRTVETQLYHSLKKIAAILEE
SQVILPRRSSR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaatacacagttgtctgaaatatccaaacggatcgaaaatgacgatgaaaatgca
ttccgggagatctacgatctgttctatttcgacctggtagccttttcccggcagatcgtt
ctggacgatgccgctgcggaagacgccgtggagaatgtgttcatccggctatggcagaac
cgcaaaacactgggcaatatcaacaacctttccgcttacctttacaccgccgccaaatac
gcttccatcaattacctcaaagcgaggaaaaatgtgagcgacgtatccatcgaagatctc
gacgatcagagcctgtattccttctccacgcccgaaacttccatgatcgggaaggaagaa
gtcctcaccatcgaaaaggccatcaaccagctgccgcccaaatccaagctcgttttttat
cttgtgaaggaaaaagggctcaattgccgggaagtggccaaaatcctcaactcctccgtt
cgtacggtagaaacccaactctaccattccctcaagaaaatcgccgccatcctggaagaa
agccaggtgatcctccccaggcgaagcagccggtag
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