KEGG   Cryptococcus deneoformans JEC21: CNA01020
Entry
CNA01020          CDS       T00243                                 
Name
(RefSeq) pre-mRNA splicing factor, putative
  KO
K12825  splicing factor 3A subunit 1
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNA01020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cne03041]
    CNA01020
Spliceosome [BR:cne03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CNA01020
 Complex B
    CNA01020
 Complex C
   U2 SnRNP specific factors
    CNA01020
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin zf_UBZ Get5_N Rad60-SLD Znf_XAF1_N Zn_Ribbon_1
Other DBs
NCBI-GeneID: 3253853
NCBI-ProteinID: XP_566533
UniProt: Q5KPZ5
LinkDB
Position
1:join(281127..281322,281372..281675,281730..282403,282453..283564)
AA seq 761 aa
MSALNLPKPVNTYAGEDELRNPNGVAGVANGQAVQENEDAEEEWVPPKASDKLKIGIIYP
PKEIRNIVDKTAIHISKSPTPLLLEEKIREHQKTDPKFAFLNDADPYHQYYRYMIVKSQE
DAEDAAKGIVKPQEEKKMEKKDEGPKATEPKPWEFKVDLPGVTAMDLDILRLTALFHARR
GRSFLSSLSVKEGRNYQFDFLRPTHSLYGYYNRMVESYQKIMQPPPGLIDGVIKEANDPD
WKWHILDEARNRAEWEKTRRKRENERAKEEEEEAKAFAAIDWQDFVTVETIEFTQNDEQL
ELPPPTSVEKLKSMSMAEKRMAAMVMEETGAGPTGETAPPAEEMEMEEDEEEEEARLQRI
KAEQEQARAREVQRAAMEQRGMKIKKDYVPRGIQRTNAVATAICPNCGQSIPENELTEHM
RIELLDPKWKEQKKQLELRRAQAQQLQQGADVVSSLKNLASARTDIFGDDVDEAERKRRE
EEERQKRREREKIVWDGHTASAAKTAETFQSQFSLDEQIKKLHNRAGLTDQPSNAPGPQI
GPGITQQAHVPTPLAAGLSTPGGGTAYAGATISAAPTGPTTKEYISTPYDPSFGGTPPPP
PGSAPSIHPSRLAAMGGNTPYLGSATPPMAGQVHPRAEDEGAGDRPVFKRPKIEKLPYGQ
LYTEIDWQSLHPEPISIAVQLPSMPEKPEWKLDGSIITVPDLPVSTLFSTIRERIRRILD
TDVPISRMRLDYNNKPMSNSSTLASVNLDEGDMLSLVVKKK
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgtccgctctcaaccttccaaagcccgttaatacctacgcgggtgaagatgagctaagg
aatcccaatggtgtagcgggggtggcgaatggccaggcagttcaggagaatgaggatgcc
gaggaggaatgggtgccacccaaggcgagcgacaagctgaagattggcatcatctatcct
ccgaaggagatcagaaacatcgtcgacaagaccgcaatccatatctccaaatctcccact
ccccttcttcttgaagaaaaaatccgtgaacatcaaaagacagatcccaaatttgcattt
ttgaatgatgccgacccatatcaccaatactacaggtatatgattgtcaagtctcaagag
gatgcggaggatgctgcaaaggggattgttaagcctcaagaagagaagaagatggaaaag
aaggatgagggacccaaagcaaccgagccgaaaccctgggaattcaaggtcgaccttcca
ggcgtgactgctatggacctcgatatcctccgacttacagccctcttccatgcccgtcgc
ggccgctctttcctctcttcgctttccgtcaaggaagggcgtaactaccaattcgatttc
ctgcgccctacccactctctctatggctactacaaccgcatggtggagtcttatcaaaag
atcatgcagccaccacctgggctcattgacggcgtcatcaaagaagcgaacgaccctgac
tggaagtggcatattcttgacgaggcaagaaacagggccgagtgggagaagactagaaga
aagagggagaacgaaagagccaaagaggaagaagaagaggccaaggcttttgctgcgatt
gattggcaagattttgtcaccgtcgagacaatcgagtttactcagaacgacgagcaactt
gaattgcctcctccaacatctgtcgagaaactcaaatccatgagcatggccgaaaaacga
atggcagccatggtcatggaagagactggtgctggcccaacgggcgagacagctccgccc
gcggaagagatggaaatggaggaggacgaagaagaggaagaagccaggttacagaggatc
aaagcagagcaggagcaggccagggcccgagaagtgcaaagggcagctatggagcagaga
ggtatgaagataaagaaggattatgtgccaagaggtattcaacgtacaaacgctgtcgcc
actgccatttgtcccaattgtggtcaatccatccctgaaaatgagctcactgaacacatg
cgtatcgagcttcttgatcccaaatggaaagagcaaaagaaacagctcgaactccgacgg
gcccaagctcaacaactccaacagggtgccgatgtcgtctcctccctcaaaaaccttgct
tccgcccgtacagatatctttggtgacgacgtggatgaggctgaacgaaagagacgagag
gaagaagagaggcagaagagaagggagagggaaaagattgtttgggatggtcacactgct
tctgcggccaagacggcggaaacattccagtcccaattcagcctcgacgaacagatcaaa
aaattgcacaaccgtgctggtctcactgaccaaccttccaatgctcccggtccccagatt
ggccctggcataacccaacaagcccacgtccctaccccactcgctgctggtttgtccacc
cccggaggcggtacagcctacgctggcgctaccatctctgccgcacctactggacctact
accaaagagtacatctcaactccgtatgacccctcctttggcggtacaccccctcctcct
cctggatctgcgcccagtatccatccttcacgtttggcagccatgggtgggaacactcct
tatcttggttccgcaaccccgcctatggctggccaagttcacccgcgagcggaggatgaa
ggtgccggcgaccgaccggtgttcaagcgccccaagattgaaaaacttccttacggtcag
ctttacactgaaattgattggcaatctctccaccccgaacccatctccatcgctgtccag
ctcccttccatgcctgaaaagcctgaatggaagttggatggatcaatcatcaccgtacct
gatctgcctgttagcacattgttttccacgatccgagagaggattagaagaatccttgat
acggatgtgccgattagtagaatgaggttggattataataataagccaatgagtaactct
agcacgttggcaagtgtgaatttggatgagggagatatgcttagcttggttgtgaagaag
aagtag

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