Cryptococcus deneoformans JEC21: CNA01270
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Entry
CNA01270 CDS
T00243
Name
(RefSeq) U1 snRNP 70K protein (short form), putative
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNA01270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cne03041
]
CNA01270
Spliceosome [BR:
cne03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
CNA01270
Complex B
CNA01270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
Motif
Other DBs
NCBI-GeneID:
3253767
NCBI-ProteinID:
XP_566577
UniProt:
Q5KPW9
LinkDB
All DBs
Position
1:complement(join(344221..344416,344470..344941,344991..345132,345188..345252,345300..345714))
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AA seq
429 aa
AA seq
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MSHLLPPNLLKLFAPRPQPPFLKPLTRDERIRGPNNLGGVAGLAKRIKEEAEDAEVKQGM
GMNPEKALDEQKEENVKMELKQDGEDGEVAEDSGKEKKKKTARDKIAEMGIIGEEAVKMR
KELRKKRQEEYKKNAESNYKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIE
RIRIVRNRKGKSNGYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQR
LGGGLGGRPKPVAPEASPAPYVAPSNLRGGRGGFRGGGRGGGAGFRGGFQGNRGGFGGGN
RGGFGGGDDRGGFAGRGGFRGGFQNRGDRGPGGFGQQQGGFGGPGGPGGYGGQGGGYGGG
GGGFGGPGQQNGVQGGQGGGGFGGGGGYKRDYDNAGGPGGYGGGGGGGGGGFGGGGGGYQ
DRDPKRMRY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacctccttcctcctaacctcctgaagcttttcgcccctcgacctcagccgccc
ttcttaaaacccctgacgagggacgaacgcatccgaggtccaaacaaccttgggggtgtt
gccggccttgctaagcgtataaaagaagaagccgaagatgctgaggtcaagcaagggatg
ggcatgaatcccgaaaaagctctcgatgaacaaaaggaggaaaatgtaaagatggaattg
aagcaagatggcgaagatggagaggtcgcggaggattctggcaaggagaagaagaaaaag
acagctagagataagattgcggagatgggtatcattggagaggaggctgtcaaaatgagg
aaggaattgaggaagaagaggcaagaggagtacaagaagaatgccgagagcaactataaa
cctcaggatgacgctcaagccatcggtgacccttataaaacccttttcatctcaaggcta
tctaagaaagcgaacgagacagaccttcgccgagagtttgaaatgtatggccctatcgag
cggatacgtatcgttcgaaatcgaaagggcaagagtaacggctacgcctttattgtttat
gagcgagaacgagatatgaaagccgcatacaaggacgctgaaggcattcctattcaccac
aagaagattcttgtcgatgtcgagcgtggacgcactgttaaaggatggaaacctcaacgt
ctcggtggaggtcttggtggccgtcccaaacccgtcgccccagaagcctcccctgcaccg
tatgtcgctcccagcaacctccgaggtggccgaggagggttccgtggaggaggacgaggc
ggcggtgctggtttccgaggtggttttcaagggaacaggggagggtttggcggaggtaac
agaggaggatttggcggaggggatgacagaggaggtttcgctggacgaggcggtttccga
gggggtttccaaaatcgaggagatcgtggtcctggtggatttggccaacaacagggaggg
tttggcggtccaggaggcccaggtggatacggtggacagggaggagggtacggtggcggt
ggtggcggcttcggcggtcccggccagcaaaatggagttcaaggcggacaaggtggagga
ggctttggggggggtggaggttacaaacgcgattacgacaacgccggtggacctggtggt
tatggtggaggaggcggcggtggtggtggtgggttcgggggaggcggtggaggttaccag
gacagggatcccaagaggatgcggtattga
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