Cryptococcus deneoformans JEC21: CNA01350
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Entry
CNA01350 CDS
T00243
Name
(RefSeq) splicing factor Prp8, putative
KO
K12856
pre-mRNA-processing factor 8
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNA01350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cne03041
]
CNA01350
Spliceosome [BR:
cne03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CNA01350
Complex C
U5 SnRNP specific factors
CNA01350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
PRO8NT
U6-snRNA_bdg
U5_2-snRNA_bdg
RRM_4
PROCT
Hom_end_hint
JAB
GIIM
Motif
Other DBs
NCBI-GeneID:
3253726
NCBI-ProteinID:
XP_566595
UniProt:
Q5KPW2
LinkDB
All DBs
Position
1:join(359679..359891,359956..360111,360167..361947,362000..362643,362693..362787,362839..363059,363114..364266,364316..364467,364522..365229,365282..365496,365553..365602,365653..366573,366622..366796,366847..367892,367952..368020)
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AA seq
2532 aa
AA seq
DB search
MSTVPPGFGAPPPGFTPQPNGNGDGMEGDFFGQLSQEEIDKKARKWRQSQKRRFNSKRRQ
GGGGGVDFGKADLPPEHIRKIIKDHGDMSNRKFRNDKRVHLGALKYVPHAVMKLLENIPM
PWEQVREVPVLYHISGAITFVNEVPRVIEPVYHAQWASMWLAMRREKRDRRHFKRMRFPP
FDDEEPPMDYGDNVLDVEPLEAIQLELDEEDDEAILEWFYDPKPLVDTPQVNGSSYKYFQ
LALPQMANLYRIGRQLLSDYSDNNAFYLFDKKSFFTAKALNIALPGGPKFEPLYRDMDAF
DEDWNEFNDINKIIIRNVIRSEYKVAFPHLYNSLPRSVYIGVYHEPKNVYIKTDDPDLPA
FYFDPLINPISQRVVQEAHTPLVSHEDQVFGFGNDEDVEFELPEEVEPFLGERDLENENT
SDAIALYWAPYPYNLRSGKMKRAQDVPLIKNLYLEHCPDGQPVKIRVSYQKLLKVYVLNA
LHNKPPKAMVKRNLFRSLKNTKFFQATTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHL
DYNLNLKPIKTLTTKERKKSRFGNAFHLCREILRLTKLIVDAHVQFRLGNVDAFQLADGL
QYMFAHVGQLTGMYRYKYKLMKQIRMCKDLKHVIYSRFNTGPVGKGPGVGFWAPGWRVWL
FFMRGIVPLLERWLGNLLARQFEGRNSKGIAKTVTKQRVESHFDLELRAAVMHDILDMMP
EGVKQNKAKTILQHLSEAWRCWKANIPWKVPGMPAAIENIILRYVKSKADWWTSVAHYNR
ERIRRGATVDKAVVRKNLGRLTRLYLKAEQERQNGYLKDGPYITSEEGTAILISTAHWFE
SRKFAPIPFPPLSYKHDTKLLVLALEKLKEAYSVHGRLNQSQREELALVEQAYDNPHECL
SRIKRLLLTQRAFKEAGIEFFDTYDKLIPCYDVEPLEKLSDAYLDQFLWYEADKRRLFPS
WVKPSDSEPPPLLVYKWCQGINNLTDIWDTSEGESVVMMETVLARVYEKVDLTLLSRLLR
LIMDHNLADYITSKNNTTLTFKDMSHINTYGMIRGLQFSSFVFQYYGLVLDLLILGLERA
SEIAGLPEAPNGFLQFKNREIETKHPIRFYSRYVDRIHMLFRFTAEESRDLIQRYLSVQP
DPNNENVIGYNNKRCWPRDCRMRLIKHDVNLGRAVFWNVKNSLPRSLTTIEWEDTFVSVY
SKDNPQLLFSMCGFEVRILPRVRTQHGEAYSLKDGVWNLTQESTKERTAQAFLRVSDQGI
QDFNNRIRQILMSSGSATFAKIINKWNTCLIGLMTYYREAVVHTNELLDSLVKAENKVQT
RVKIGLNSKMPSRFPPCVFYSPKELGGLGMLSMGFVLIPQSDLRWSKQTDSGGITHFRSG
MTHEEDQLIPNLYRYLQPWEAEFLDSARVWSEYALKRKEATASNRRLTLEDLEDSWDRGI
PRINTLFQKDRHTLAYDKGWRVRQYFSQFFRLRNQPFIWTNQRHDGKLWQLNNYRVDVIS
ALGGVEGILEHSLFKGTAFPTWEGLFWEKACLQNGTRLLRADGSEVLVEDVQEGDQLLGP
DGTSRTASKIVRGEERLYRIKTHEGLEDLVCTHNHILSMYKERSGSERAHSPSADLSLTD
SHERVDVTVDDFVRLPQQEQQKYQLFRSTASVRHERPSTSKLDTTLLRINSIELEDEPTK
WSGFVVDKDSLYLRHDYLVLHNSGFEESMKNKRLTNAQRSGLSQIPNRRFTMWWSPTINR
ANVYVGFQVQLDLTGVFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQEMEAL
QIETVQKETIHPRKSYKMNSSASDILLFSSYKWQISRPSLLTDNRDTMDGTTSNKFWLDI
QLRWGDFDSHDIERYARAKYLDYSSDSQSIYPSPTGNLIAIDLAYNLYSAYGCYFPGLKP
LLQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLNSSNYSELFSNQIIWFVDDTN
VYRVTVHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEE
VAALVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQATLKMEKFGD
LILRATQPQMVLFNLYDDWLKSISSYTAFSRLILILRALHVNNEKSKIILRPDKNTITES
YHIWPSLSDDEWMKVEVALKDLILADFGKRNSVNVASLTASEIRDIILGMEIAAPSVQRQ
QMAEIEKNTEAAAQVTALQTKTTNIHGDEIVVTTTTQYEQQTFASKSDWRVRAISATNLP
LRVNHIFVGNDDVKDDAGSYTYVIPKNVLRSFIVNADLRTQVVAYLYGTSPPDNKQVKEI
KAVAWIPQRGTNNGVDLPVTLPKHDFLLKDLEPLGWIKTQSQELNHLSPQDVTTQAKIMA
AHPEWGPQSICVTCSFTPGSVSLNAWDLTVAGFEWGRKNEDVTGQNPGFNPSMANRVQLL
LSDRILGMTLVPEGGIWNYGVGLTQSWSEKIPYTMTLDKPEAFWAPCHRPNAFLNFASME
GDDAADVENSLE
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgttccgccaggattcggtgcgccgcccccgggattcacccctcagccaaac
ggaaacggagacggcatggagggagacttctttggacaattaagccaggaggagattgat
aagaaggccagaaaatggaggcagagtcagaagagaagatttaactctaagagaagacag
ggtggcggtggtggtgtggattttggcaaggctgatctgccgccagagcacatcagaaaa
atcatcaaggatcacggagatatgtcaaataggaagtttaggaatgacaagcgagtgcat
ttgggtgccttgaagtacgtgcctcatgcggtcatgaagcttttggagaacatcccaatg
ccctgggaacaagtacgagaggttccagtgctctaccacatttccggtgccatcaccttt
gtcaacgaagttccccgagttattgaaccagtgtaccacgctcagtgggcttctatgtgg
cttgcgatgcgtcgagaaaagcgagatcgacgacactttaagcgaatgcgattccctcca
tttgatgacgaagagccgccgatggattatggagataatgtattggatgttgagccgtta
gaggccattcagttggaattagatgaggaagacgatgaggctatcttggaatggttctac
gaccccaagcccctcgttgacacccctcaagtcaatgggtccagctacaaatatttccaa
ctcgctcttcctcagatggccaacttgtaccgaattggtagacaattgttgagcgattac
tcggacaacaacgcattctatttgttcgataagaagagtttcttcaccgccaaagcgctt
aacattgccttgcctggtggccccaaattcgagccgttataccgagacatggacgccttc
gacgaggactggaacgaattcaatgatatcaacaagattatcattcgaaacgtcatccga
tctgagtacaaggttgccttccctcatctctacaactctcttcctcgatccgtctacatt
ggtgtctatcacgagcccaagaacgtttacatcaagaccgatgaccccgacctccctgca
ttctactttgaccctcttatcaaccccatctctcagcgagtcgtgcaggaagctcacact
cctctcgtctcccatgaggatcaagtcttcggatttggtaacgatgaagatgttgagttc
gagttgcccgaggaggtagagccattcttgggagagagggatttggagaatgagaatact
tcggacgccatcgcgttgtattgggcaccatacccttacaatttgcgaagtggcaaaatg
aagcgagctcaggatgtgcctttgatcaagaacctttatcttgaacattgccctgacggt
cagcccgtcaagattagagtttcttaccagaagcttcttaaggtgtacgtgttgaacgct
ctccacaacaagccccccaaggcgatggtcaagcgaaaccttttccgaagtttgaagaac
accaagtttttccaggccaccactcttgactgggtggaagccggtcttcaagtttgtcgc
caaggttacaacatgctcaaccttcttatccaccgaaagaacctcaattacctccatctt
gattacaatctcaacctcaagcccattaagactcttacgaccaaggagcgaaagaagtct
cgattcggtaacgctttccacctttgccgagaaattcttcgtctcaccaagctcattgtt
gacgcccacgttcaattccgactcggtaacgtcgacgctttccagcttgctgatggtctt
cagtacatgttcgcgcacgtcggtcaattgaccggtatgtatcgatacaagtacaagctt
atgaagcaaatccgtatgtgcaaggatctcaagcacgtcatctactcgaggttcaacact
ggccctgttggtaagggtcctggtgtcggtttctgggcgcccggatggagagtctggttg
ttcttcatgaggggtattgtccctttgcttgaaagatggttgggtaacttgctggctagg
cagttcgagggtaggaacagtaagggtatagccaagactgttaccaagcaaagagtggag
tctcacttcgacttggaactccgtgctgccgttatgcacgatatcttggatatgatgcct
gaaggtgtcaaacaaaacaaggccaagaccattctccaacatctttccgaagcttggcga
tgctggaaagctaatatcccttggaaggtccctggtatgcccgctgccattgaaaacatc
attcttcgatacgtcaaatccaaggccgattggtggacgtctgttgcccactacaaccga
gaacgtatcaggcgaggcgctactgtcgacaaggctgtcgttcgtaagaaccttggtcga
ttgacgagattgtacctcaaggctgagcaggagaggcagaacggttatctaaaggacggt
ccttacatcacttccgaagagggtaccgctatccttatctctactgctcactggtttgaa
tctcggaagtttgctcctatccccttccctccactttcttacaagcacgacaccaagctt
ctcgttcttgcccttgaaaagctcaaggaagcgtacagcgtccacggtcgacttaatcag
tctcaacgagaagagttggcgctggttgagcaggcatatgataacccgcacgagtgtttg
tcgcgtatcaagaggttattactgactcaacgagcgttcaaggaagctggtattgagttc
tttgacacttatgacaagttgatcccttgttatgacgttgagcctctcgaaaaactcagt
gacgcgtatcttgaccagttcttgtggtatgaggccgataagagaaggcttttccctagt
tgggtcaagccctccgattctgagccccctcccctcctcgtttacaaatggtgtcagggt
attaacaacttgaccgatatttgggacacttctgaaggcgaatcggtcgtgatgatggag
acagtgttggcaagagtgtatgagaaggttgacttgactcttctcagtcgattgttgcgt
cttatcatggaccacaatttggctgattacatcacttcaaagaacaacactactcttacc
ttcaaggatatgtcccacatcaacacctacggtatgattcgaggtctccagttctcctca
ttcgtcttccagtactacggtctcgtccttgatcttctcatccttggtcttgagcgagcc
agtgaaatcgccggtcttcctgaagcacccaacggtttccttcagttcaagaatcgagag
atcgagaccaaacaccccatccgtttctactctcgatacgtcgaccgtatccatatgctg
ttccgattcaccgctgaggagtctcgagaccttatccagcgatatctcagtgttcagccg
gatcctaacaacgaaaacgtcatcggttataacaacaagcggtgctggccccgagattgt
cgaatgaggcttatcaagcatgatgtaaaccttggtcgtgcagtcttctggaatgtcaag
aactctttgcctaggtctctcactaccatcgagtgggaagacacatttgtctctgtctac
tccaaggataaccctcagctcttgttttccatgtgcggtttcgaagtccgaatccttccc
cgagtccgtacacagcacggcgaggcttactctttgaaagacggcgtttggaatcttact
caagagtctaccaaagaacgaactgcccaggcgtttttgcgtgtctctgaccagggtatt
caagatttcaacaaccgtatccgacagattctcatgagctctggtagtgccacttttgcg
aagatcatcaataagtggaacacctgtcttattggtttgatgacttattaccgagaggcc
gtcgtgcacaccaacgagttgcttgattctcttgtcaaggccgaaaacaaggtccagact
cgtgtcaagattggtcttaactctaagatgccttctcgtttcccgccctgtgtcttttac
tcccctaaggaacttggtggtctcggtatgctttccatgggcttcgtactcattcctcag
tccgatttgaggtggtccaagcagaccgacagtggtggaattactcacttccgctctggt
atgacccacgaggaggaccaattgattcctaacttgtaccgatacttgcaaccttgggaa
gcggagttcctggactctgccagagtgtggtctgaatacgctttgaagaggaaggaagct
accgcttctaaccgtcgactcacccttgaagatctcgaagacagttgggaccgaggtatt
cctaggattaacacccttttccagaaggacaggcacactcttgcttacgacaagggatgg
cgagttcgtcaatacttcagtcaattcttccgactccgtaatcaaccattcatctggact
aaccagcggcatgatggtaaactctggcaacttaataactaccgggttgatgtcatctct
gctctcggtggtgttgagggtatcttggagcactccttgttcaagggaactgccttccca
acctgggagggtctgttctgggagaaagcctgtctgcagaatggtactcgtcttctccgt
gccgatggctctgaggtccttgtggaagatgttcaggagggcgatcaacttcttggtccc
gatggaacgagcaggacggcgagcaagattgttcgcggcgaagagcgtctctaccgtatc
aaaacccatgaggggctcgaagatcttgtctgtacccataaccacatcctttctatgtat
aaagaaaggtctggttcggagcgagcccattctcctagtgccgacctcagcctcacagac
agccatgagagagtcgatgtgactgtcgatgactttgtccgccttcctcaacaagagcaa
cagaagtatcagcttttccgttcaactgcttctgtgcgacacgagcgaccatccacttct
aaattagacaccaccttgttacgcatcaattctatcgagcttgaggacgagcctacgaag
tggtccggttttgtggttgacaaagacagtctttatcttcgtcatgactatttggtattg
cacaactcaggctttgaggagtccatgaaaaacaagcgactgaccaacgcccaacgttcc
ggtctttctcagattcctaatcgtcgattcaccatgtggtggtctcctaccatcaacaga
gccaatgtctacgttggtttccaagtccagctcgatttgactggtgttttcatgcacggt
aagatccccactttgaagatctctttgattcaaatcttccgagcgcacttatggcagaag
atccacgagtcggttgttatggatttgtgtcaagtcttcgatcaagagatggaggcactc
caaatcgagactgttcagaaagagactatccacccgcgaaagtcgtacaagatgaactct
tcggcttccgacattctccttttctcgtcttacaagtggcagatctctcgcccttccctg
cttactgataaccgggacactatggatggcactacctccaacaagttctggctcgacatc
cagctccgatggggtgactttgactctcatgacatcgagcgttacgcccgtgcgaagtac
ctcgactattcttcggacagtcagtctatctacccatcgcccactggtaatcttatcgcg
attgacttggcatacaacctctattcggcgtacggctgttacttccccggtctcaagcca
ctcctccagcaagcgatggcgaagatcatgaaggccaaccccgctttgtatgttttacgt
gagcgtataaggaagggtcttcagctctactcatctgagcctactgaaccttatcttaac
tcttccaactactccgagttgttctcaaaccagattatctggttcgtagacgacactaat
gtctaccgagtcacagttcacaagacttttgaaggtaacttgactaccaagcccatcaac
ggtgctattttcatcttcaatcctcgtactggtcaactcttcttaaagatcattcacacc
tcggtttgggctggtcagaagcgtctaggtcaattggccaaatggaagacggccgaagaa
gtcgctgctttggttcgatcattgcccgtggaagaacaacctaaacaagtcattgttact
cgaaagggtatgcttgaccccttggaagtccatttgcttgatttccccaacatcgttatc
aagggttccgaactccagttaccattccaagcgactctcaagatggagaaatttggtgac
ttaatcctgcgtgcaactcaaccccaaatggttttgttcaatctttatgacgattggctc
aagtctatctcaagttacactgccttctctcgtcttattcttatccttcgtgctttgcac
gtcaacaacgagaagtctaagattattttgagacctgacaagaatactatcacagagtct
taccacatttggccatcgctcagtgacgacgagtggatgaaggttgaagtggctctcaag
gatctcattttggccgactttggtaagaggaacagcgtcaacgtagcctccctcacagcc
agcgaaattcgagacatcattctgggtatggagattgcagcgccatccgttcaacgacaa
cagatggctgagatcgaaaagaacaccgaggctgccgctcaggttactgctcttcagacc
aaaactaccaacatccatggtgacgagatcgtcgtcacgacaactacccagtacgaacag
caaacctttgctagtaagtctgactggcgtgtacgagctatcagtgccaccaatttgcca
ctccgtgtcaaccacatctttgtcggcaatgatgatgtgaaggacgatgctggcagctac
acatacgttattcccaagaacgtcttacgaagcttcattgtcaacgccgatctccgtaca
caggtcgttgcctacctttatggtacttcaccccctgacaacaagcaggttaaggagatc
aaggccgtcgcttggatccctcagaggggtaccaacaacggtgtagatcttcctgttacc
ttacctaagcatgacttccttctcaaggatcttgagccccttggttggattaagacacag
tcacaagaactcaaccacctttctcctcaggacgttactacccaagcgaaaattatggca
gctcaccctgagtggggacctcaatccatttgcgtcacctgttctttcactcctggttcc
gtctctctcaacgcatgggacctcacagtggctggcttcgaatggggtaggaagaacgag
gatgtcacgggccagaaccctgggttcaacccgtccatggccaaccgagttcaattattg
ttgtctgacaggattttgggtatgaccttagttcctgagggtgggatttggaactatggt
gttggtttaactcagagctggtcagaaaagattccttacacaatgactcttgacaagcct
gaggcgttctgggccccttgccaccgacctaacgctttcctcaactttgcctccatggag
ggggatgatgcggctgacgttgagaatagtttggagtaa
DBGET
integrated database retrieval system
