Cryptococcus neoformans var. neoformans JEC21: CNA05935
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Entry
CNA05935 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNA05935
04121 Ubiquitin system [BR:
cne04121
]
CNA05935
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
90S particles
Other 90S particles
CNA05935
Ubiquitin system [BR:
cne04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CNA05935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SCAP
Cytochrom_D1
RBM39linker
Motif
Other DBs
NCBI-GeneID:
36392699
NCBI-ProteinID:
XP_024514174
UniProt:
A0A0S2LI92
LinkDB
All DBs
Position
1:complement(join(1588363..1588388,1588435..1588766,1588827..1589092,1589149..1590042,1590088..1590090))
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AA seq
506 aa
AA seq
DB search
MKIKTISRSLDDHLPSSSSAPHPLSHNLAPHLHPFAKPREYTRAVTAVKMERMFAKPFVD
ALGGHQDGVYCLGKDSRRAGVVAGGGGDGEVIVHSLGLRRPLLKIPGAHRGMVSGICWTS
EAQDRRRGLITCGKLDGTIKLWRSEAFAPGLRDKDAFQGNEFGLGQGEGSGFLDQAGAIG
ESGYDEEEGGGLSLDSAKRDALGQNLEPTMTFTSKNGLNGIDHHRTDAVFATASNTVQIW
DEQRTAPLSTLQFGSSMETVSGVKFNQSETSVLASVGNDRTMCLYDIRTGKAERRIVTQF
TSNCLSWCPTLPTLLLLGSEDHNLYTFDIRNLETPNQIYKGHVGGVMGCDWSPTGEGFVS
GSYDRTVRLWNREEGKSRDVYHTKRMQRVFDVSYTPTADFVLSASDDGNVRIWKSDASKK
LGPVSTKERQAIEYRQKLVERYAREKGVREVKERRHVPQSIHNATKLKREMIEARNIKED
RRRKHSRAGREKPKAERKKTVVVEQR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaaaccatctctcgctccctggacgatcatcttccctcttcctcctctgct
ccccatcctctgtcgcacaacctcgcgcctcatctccatccttttgcaaagccaagagaa
tacacacgtgccgtcactgccgtaaagatggagcgcatgtttgccaagccttttgttgac
gctcttggtggtcatcaggacggtgtctactgtctgggtaaagactcgagacgggccggc
gttgttgccggtggtggtggcgatggcgaagtcattgtacattccttgggcttgaggaga
ccattgctcaaaatcccaggagcccataggggtatggtcagtggtatatgctggacgtct
gaggcgcaagaccgtcggcgaggactgatcacctgcggcaaacttgacggcaccatcaaa
ctttggcgaagcgaggcgtttgcccctggtttgagagacaaggatgcttttcagggcaat
gagtttggtcttggacaaggtgaaggaagtggatttttggaccaggccggagcgattgga
gaaagcgggtatgatgaggaggaaggcggaggcttgtcgcttgattcggcaaagagggat
gcgttggggcaaaatcttgagcccacgatgacttttacatccaagaacggtttaaacggc
atcgatcatcaccgtacagatgcggtatttgctactgcttcaaacactgtgcagatctgg
gacgagcagaggacggcaccattaagtacacttcagtttggaagctcaatggagacagtg
tctggcgtcaagttcaatcagagcgagactagtgtgctggcaagtgtgggtaatgacaga
acaatgtgtttgtacgatatccgaacgggcaaggccgagagacgtattgttacccagttc
acgtccaattgcctctcgtggtgtcccactctccccacccttcttcttcttggctcagag
gatcacaacctctacacgtttgacattcgtaacctggaaactcctaaccaaatttacaag
ggccacgtcggtggtgtcatgggatgcgactggagcccgacgggtgagggatttgtctct
gggtcctatgacagaactgtgcggttatggaacagagaggaaggcaagtcaagggacgtt
taccacaccaagcggatgcagagagtatttgacgtcagctacactcccactgccgacttt
gttctctccgcgtcggatgatggcaatgtgcgcatatggaaatcggatgcgtccaagaaa
ctcggccctgtttcgaccaaggagcgtcaagctattgagtatcgacaaaaattggtggag
agatacgcccgggagaagggagtcagggaagtcaaggagaggaggcatgtgccgcagagc
atccacaatgccacaaagctgaagagggaaatgatagaggcgcggaatatcaaggaggac
aggaggcggaagcactcacgtgctgggcgggagaagccgaaggcggagaggaagaagact
gtggttgtggagcagcggtag
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