Cryptococcus neoformans var. neoformans JEC21: CNA06440
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Entry
CNA06440 CDS
T00243
Name
(RefSeq) nucleoporin nsp1, putative
KO
K18721
nucleoporin NUP1
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNA06440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNA06440
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNA06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
3253959
NCBI-ProteinID:
XP_024511982
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All DBs
Position
1:complement(join(1748953..1750215,1750267..1751771,1751818..1752135,1752189..1752360,1752426..1752725,1752773..1753705))
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AA seq
1496 aa
AA seq
DB search
MSDLHRALSGAHRPNSNPRIHRHSSPYKRPLGQSALHPSSTMGDLASLAGRETSPTKKPV
PTSRVQSLASGGSLTRSGSEPSLLSGIKSIFTRPLQWLSTPGKTAGVSKRDSLSSFGNEL
EDPESPSDRREGKRIRRHSPEPRTNRFNDLASDYAPEHQFEVQGRAVSGFMLPPLSPHVT
LKPKSSFSNDKTAHRKPANFSRPLTSSQSMSYLDPPSNVLRSSAYGQAVASPKKTGTLTR
SKRVDLATLADDDAGFQEDSLGKDDRGKEKEIWSPWKSKYAGANGASSTAAAQKNITPGR
KTFAQTLEDGDHAHPMASPFRGLPTASPRPRQPSTIGLGRSATAANLRRHASVVSDLSMA
SAGDTVRSTSIRNLRDLEIHSPPGGSISRDKDDDRMSVEGDSIRRKEGSVLDWFMHDQWE
KPKSPASVAASNRLGTSMPRAAPTPMRRGQMVWNQDDKVFMRESELKASQRPAPVHKNEA
ERILYTLEAMRKTPLTDARKGDIPPLLGQSSRTLRRSINVPLATAAGGESAKQRKDKERF
GDLGVSVMISPYGRRRVADREAREVRKHSRMESQEYRPSPTPSDARSETASQISGAQIEY
LAPKESSPSPSAPTPRRSSRLNRTNAVEETTPKANRRSTRRGAPKQPAPVHEEEPVTRSS
RSTRRTKKTVVERSTSPTPPPAPPSVPSIIATAPSPGKPSTSDTYQPRAVDQMPRGGSSL
RARSDTSKRTHQSAASYSRSQTPPTSGRYSAKDEDLPDMEELEKASKIALPSFSGISFAG
LKPSGDENASNNTMPSKSVTTPAAPLPPLSLPRAGGPLARLGVASTRPRASSPLAAGSIV
AAPDSPPTMPVPNKNDSSPLANGIFPISGGTTEKSASLNPTGSTTPAGKPPAASSFFSKA
PTSTEAAKKPSFSFGDSSSKVSGETISGAGKAEAGSIPNFFGSATVSSASSTKQSSPVPV
PALDFGVQKKDSGEKAPPAALPPPIASASASPAPVFSFGASVNGNKEGDKEKTTDSAASP
FSFGGKEPEVAKKDSAAPSGGFSFGVKKDSTSGGEFSFGKSKDSPAAASNAVPSFSFSVS
KPAASDTVTKSPFSFGAPASDKPKSDEPSKPAFTFGQSNSSSAAPDSVNSSHTPSKPAFS
FGAPAPSSNTPASKPAFTFGASSSTTPVTTPTTAVANKDATGGGITAPSTTPAFGGFSFG
SQAVNKAEDKKDAPANPFGGTSNNNSTFTLGGPANKSIAANGTSSPFGTAPSTVANADSA
KNPFDNKSGPNGVTAPAFTFGAPGNASMKPANAGAFGSNVSTGSQPFVFGASSVNGGSTS
APLNTFKTDNVAKPSTPAFAFGSGSNATPASNPFNASTAPASNPFGQQQDQKPNAPASFA
FGATNNSVAAPASNSSFSFGQPMNASPAASTSTFSFGQPAQQQSSTPAAPSFSFGQTAAQ
PQPAAAFSFGAPAGDASRFKSPTPGPEGGFSLGVATNEAAPASPGGRRVKGLPRRR
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctccaccgcgccctctcgggcgcacatcggcccaactcgaatcccagaata
cataggcatagcagtccctacaagagaccattaggccaaagcgctctgcacccctcttcc
accatgggtgaccttgccagccttgccgggcgcgaaacttctcctacgaagaaacccgtc
cctacttccagagtccagagtctcgcgtccggtgggagccttaccagatcaggtagcgaa
ccgtcactgttgtctggaataaagtctattttcacaagacctcttcagtggctctccaca
cctggaaagacagcaggagtatctaagcgtgacagcttgtcatcctttggtaacgaactg
gaggatcctgagtctccgtccgatagacgagaaggcaagaggatacgaaggcactcacca
gagcctcggacgaaccggtttaacgacctcgccagtgactacgcaccagagcatcagttt
gaagtccaagggcgcgccgtgtctggctttatgcttcctcccctctctccccatgtcacc
ctcaaacccaagtcctctttttctaatgacaagaccgcacacagaaagcctgccaatttc
tctaggcccctcacctcttcccagtccatgtcatatctcgaccccccgtccaacgtgctg
cgatcttcagcgtacgggcaggctgttgcttcaccaaaaaagactggcacattgactcgt
tccaagagggttgacttagctacacttgcagatgatgatgctggtttccaggaagatagt
ttaggcaaggatgacagagggaaggaaaaagagatctggagtccgtggaagtctaaatat
gccggtgctaatggagcttcatcgactgccgccgcacaaaagaacattactcctggccgc
aaaacgttcgcgcagacattagaagacggtgatcatgctcatccaatggcttcacccttc
cgaggactgcccactgcctctcctcgaccgcgtcaacccagcaccattggtctcggtcgc
tcagcaactgccgctaacctgcggcgtcatgccagcgttgtctctgatctcagcatggcc
tccgcaggtgacactgtaagaagcaccagcataaggaacctacgggaccttgaaattcat
tcgccgccaggaggaagtataagtcgtgacaaagacgatgataggatgagtgttgaagga
gatagcatcaggcgaaaagaaggaagtgtcctggattggttcatgcacgaccaatgggaa
aaacccaaatcacctgcatctgtggctgcctccaacaggttaggcacatcaatgcctaga
gctgccccgactcccatgagaaggggccagatggtttggaatcaggatgataaggtcttt
atgagggagagtgaactcaaagcttcgcaaaggccagcacctgttcacaaaaacgaagcc
gaacgcattctttacactttggaagccatgcgtaaaactcctctcactgatgctcgaaaa
ggcgacattccacctcttctcggccaatcctcccgtactctccgacgaagcattaacgtc
ccgcttgcgactgctgctggtggtgaaagtgccaaacaaaggaaagacaaagaaagattt
ggtgacttgggagtatcagtcatgatcagcccgtatggtcggagaagggtagctgacaga
gaggcaagggaggtcaggaaacatagtcggatggagagtcaagagtatcgaccatcccca
actccatcggatgcaagaagtgagactgctagccagatttccggcgcccaaattgaatat
ttggcgcctaaggaatcctctccttctccttccgctcccactccccgccgatcatctcga
ctcaatagaaccaatgccgtcgaggagaccacccccaaagccaatagaagatctaccaga
agaggcgctccaaaacagccagcgcccgtgcatgaagaagaaccagtcacgaggtcatct
aggtcgactcggcgtaccaagaaaactgtcgttgagcgctcaacctcacctactccccct
ccggctccgccttcagtaccatcaatcattgctacagcaccttctccgggtaagccctct
acttctgacacatatcagcctcgagcggtcgatcaaatgccccgtggaggttcttcttta
cgcgccaggtccgatacgtcaaaacgaacacaccaaagcgcagcatcttactctcgatcc
cagactcctcctacttctggacgatattctgccaaggacgaggatttgccggatatggaa
gagctagaaaaagcttccaagattgcattaccctctttctccggcatctctttcgcaggc
ttgaagccttctggtgatgaaaacgcttccaacaatacgatgccctcaaagtctgtgaca
acaccagctgcacccctccctccactaagtctgccgcgtgctggtgggcctttggcccga
ctgggcgttgcgtctacccgccctagagcttcatctcctctcgctgctggttctatcgtg
gctgcgcctgactctccccctacaatgcctgtgcccaataaaaatgactcgtctccactg
gctaacggtattttccccatctctggaggtaccacagagaaatctgcttcgctcaaccct
accggctctaccacaccagcaggtaaaccgcccgccgcttcttccttcttctccaaagct
cctacttccactgaagccgcaaaaaagccatctttctctttcggcgactcttctagcaaa
gtgtctggtgaaacgatatctggtgctggaaaagctgaagccggtagcatccctaacttt
tttgggagtgccaccgtgtcgtccgcttcttcaactaaacagtcgtcgcctgtccctgtg
cctgcacttgattttggtgttcagaaaaaggacagtggtgaaaaagcgccaccagcagcc
ttgcccccacccatcgcgtctgctagtgcttcgccagcgcccgtcttctcttttggagct
tcggtaaacgggaacaaggagggggataaggagaaaactactgactctgctgcttcaccg
ttctccttcggcggaaaggaaccagaagttgcaaagaaggattctgcagctcccagtggc
ggattcagttttggcgttaaaaaggattcaacatctggtggtgaatttagctttgggaag
tcgaaggacagccctgccgcagcatctaatgctgttccctctttttcattttctgtgtcc
aaaccagcggcatcggacactgttaccaagtctccgttctccttcggtgcgcccgcctct
gataagcccaagtctgatgaaccatccaaacctgctttcacgtttgggcaatccaactca
agctctgccgccccggattctgtcaactcgtcccataccccctcaaaacccgcattcagt
ttcggtgcgcccgctccttccagcaacactcccgcctcaaagcctgcctttacatttggt
gcgagcagctccaccacccctgtaacaacccccaccacagctgtagccaataaagatgca
actgggggtgggatcactgctcccagcactacgccagcctttggaggcttctcattcggt
agccaagctgtgaacaaagccgaagataaaaaggacgcacctgcgaacccgtttggggga
acttcaaataataattcaacgttcacgcttggtggccctgctaacaagtccattgctgcg
aacgggacgagctctcctttcgggactgctccaagcaccgttgcgaatgcagactctgcc
aagaatcctttcgataataaaagtgggcccaatggggtcacggcaccagctttcaccttt
ggtgctcccggtaacgcgtcaatgaagcctgctaatgcaggcgcgtttggatcaaatgta
tcgaccggtagccaaccgtttgtcttcggtgcgagctctgtcaatggtggctctacttct
gcgcccttgaatacgttcaaaaccgataacgtcgctaagccgagcactcccgctttcgcc
ttcgggtcgggtagtaatgctactccggcgtccaacccattcaacgcttctactgcccca
gcatctaatccttttggtcagcagcaagaccagaaaccaaatgcgccggctagctttgct
ttcggtgcgaccaacaactccgtcgctgcgccagcatccaattcttcattttcctttgga
caacctatgaatgccagccctgctgcatccacttccacgttctccttcggccagcctgct
caacagcaatcctcaactcctgctgctccttcgttctctttcggacagactgctgcccaa
ccacaaccagcggcggcgttcagttttggcgcgcctgccggtgatgcttctaggttcaaa
agtcccacgcccgggccagaagggggattcagtttgggtgtggcaacaaacgaggctgcg
ccagcgagccctggtggaaggagggttaaaggtttgccacgaaggcgatga
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