KEGG T00243: CNA06890

Cryptococcus deneoformans JEC21: CNA06890

Entry

CNA06890          CDS       T00243

Name

(RefSeq) cell wall organization and biogenesis-related protein, putative

K12872

pre-mRNA-splicing factor RBM22/SLT11

Organism

cne Cryptococcus deneoformans JEC21

Pathway

cne03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:cne00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNA06890
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cne03041]
    CNA06890
Spliceosome [BR:cne03041]
Complex B
  Other components
   Prp19-related factors
    CNA06890
Complex C
    CNA06890

SSDB

Motif

Pfam:

STL11_N zf-CCCH_RBM22 Torus zf_CCCH_4 zf-CCCH_2 zf-CCCH zf-CCCH_4 RRM_YTH1 zf-CCCH_PARP12 zf-CCCH_3 RRM_1 zf-CCCH_DUS3L

Other DBs

NCBI-GeneID:

3253274

NCBI-ProteinID:

XP_566918

UniProt:

P0CR50

LinkDB

Position

1:complement(join(1879025..1879197,1879250..1879373,1879429..1879579,1879641..1879842,1879901..1879980,1880048..1880199,1880256..1880284,1880339..1880349,1880404..1880438,1880496..1880519))

AA seq 326 aa
MPAKHDINKVGVESSDFPILCETCLGPNPYVRMNKQEFGHECKVCNRPFTVFRWNPGEGR
MKKTEICTTCAKIKGVCQTCLLDLEFGLPTQVRDAALARKAQAPSSDINKQYYIQNLEAQ
MAESPDGLAYDSEVANRAGREMLKNLARTDPYYKRNRPHICSFFVKGECKRGAECPFRHE
MPKENETQKPSQQSLVDRYYGRNDPVAKKILSQNAESKGLKAPEDKSITTLLFLGLPQCN
DSHVRASLVGACPFVKPSDVKSISIVEASHCAFVNFNQRSMAERAADALAAQGGIEVEGK
KAKIVWGRARPQKKAAAAVEGSAAPA

NT seq 981 nt +upstreamnt +downstreamnt
atgcctgcaaaacacgatatcaacaaagtaggggtggagagttcagacttccctatatta
tgcgaaacctgtcttggtcccaacccttatgttcgaatgaacaaacaagaatttggacac
gaatgtaaagtctgcaaccgtccctttactgtattccgatggaatcctggagaaggtcga
atgaagaagacggaaatttgtacgacctgtgccaagataaagggtgtatgtcagacatgt
cttttggacttagagttcggattaccgactcaggttcgagatgctgctttggcaagaaag
gctcaagctccttcgtcagatatcaacaagcaatattatatccaaaatcttgaagctcaa
atggccgagtccccagatggccttgcttatgattctgaggtggcaaatcgcgcaggccga
gaaatgctcaagaatctcgctcgaacagatccttactacaagcggaataggccccacatt
tgtagtttctttgtcaaaggagaatgtaaacgaggagccgagtgcccattccgacacgaa
atgccaaaggaaaacgagacccagaaacctagccagcagagccttgtggatagatattac
ggcaggaacgatcctgtggccaaaaagattttgagtcagaatgcggagagtaagggctta
aaagcgccagaggacaagtcaattacgaccctgctgtttttaggattacctcaatgcaac
gactctcacgttagggcgtctctggttggtgcttgtcctttcgtcaagccatcggacgtg
aaatccatctccatcgttgaagctagtcattgtgcatttgtcaactttaaccaacgttct
atggcggaacgagcggcagatgcgcttgcggcccaaggaggcattgaagtggagggaaag
aaggcgaaaattgtttggggaagggcacgaccgcagaagaaggcagctgctgccgtggaa
ggatcagcagctcccgcttga

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