Cryptococcus deneoformans JEC21: CNA06980
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Entry
CNA06980 CDS
T00243
Name
(RefSeq) helicase, putative
KO
K14571
ribosome biogenesis ATPase
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CNA06980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNA06980
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CNA06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
RuvB_N
AAA_33
AAA_5
AAA_22
AAA_14
Viral_helicase1
AAA_28
AAA_2
nSTAND3
AAA_3
TIP49
ABC_tran
Zeta_toxin
RNA_helicase
AAA_18
NPHP3_N
Mg_chelatase
Cytidylate_kin2
DUF815
AAA_7
IstB_IS21
Sigma54_activat
NB-ARC
Glyco_hydro_3_C
CPT
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
3253538
NCBI-ProteinID:
XP_567015
UniProt:
Q5KNC4
LinkDB
All DBs
Position
1:complement(join(1896437..1897147,1897219..1897338,1897403..1898078,1898134..1898390,1898439..1898540,1898594..1898998))
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AA seq
756 aa
AA seq
DB search
MSGLPSLNAGITAAWNTSAPPQKKRTRRAIPLNDLPAPASPLDDSPAPATPAAPPRRKRP
RAAPSVIAAKYAPPDLDLGALGGLQPQITQLLEIAALALFHPEIYLHTGVPRPKGVLLHG
VPGGGKTQLVRCLAGELKLPFISVSAPSIVSGMSGESEKTLRDTFDEAKKVAPCILFLDE
VDAITPKRENAQREMERRIVAQLLTCMDDLAASEEPVIIIGATNRPDSLDPALRRAGRFD
HEIEMGVPSQEGREQILKVLCSKLRLSGDVDFRQLAKATPGYIGADLTALTTEAGIIAVK
RIFDSGFGIGSGTDTPHDSEQGTVPEPDGAGMEAMAIDDRYTPFANLPDDVKETPIAKFL
MSHPTALTSDQLSTISLTPADFLAALKIVQPSAKREGFATIPDVTWSDIGALSQTRDELH
MAIVQPIRHPELFSVVGIDAPSGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNK
YVGESERAVRQVFARARSSSPCVIFFDELDALVPRRDDSMSESSARVVNTLLTELDGLDA
RKAVYVIGATNRPDMIDPAMVRPGRLDKLLYVDLPSPSERFEILKTHTKKTPINEDSWQA
IKEIVASDKCDGFSGADIAALVREAATLALRAALESIGAFETPAEAEPEGIERKTDSVRV
TAEHFAHAAQKTLPSVSREQRLKYERMRDKYAGVPTRGRRQREAEAEAASVAAAAAAKLA
SAGGAGTEARVEGEGMDVDEMGGARGGGVKEKAFVA
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcttccctccctcaatgcgggcatcaccgccgcctggaacacgagcgccccg
ccccagaagaagcggacacggcgggcgatccccctcaacgacctgcccgccccggcgtcc
cccctcgacgactcccccgccccagcgacccccgccgcccccccgaggaggaagagaccg
cgggccgccccgtctgtgatcgccgcaaagtacgcgccgcccgacctcgacctcggcgca
ctcggcgggctccagccgcagatcacccagctgctcgaaatcgccgccctcgccctcttc
caccccgagatctacctccacaccggcgtcccccggccgaagggcgtcctgctccacggc
gtgcccggcggcggcaagacgcagctcgtgagatgcctagcgggcgagctgaagctgccc
ttcatctccgtgtccgcaccctccatagtgtccggcatgtcgggcgagtcggaaaagact
ctgcgagacacctttgacgaagccaagaaagtcgcgccatgtatcctcttcctggacgaa
gtcgacgccatcacgcccaaacgtgaaaacgcccaacgggaaatggagcgccgtatcgtg
gctcagctcctgacatgtatggacgatctcgcggcgagcgaagagcccgtcatcatcatc
ggcgcgacgaaccggcctgattctctggatcccgcgctgcgacgagcgggcaggtttgac
cacgagattgagatgggtgtgccctcgcaagagggtcgagaacagatcctcaaagtactc
tgctccaagctgcgtctctcgggcgacgtcgatttccgccaactcgcaaaggccacccca
ggctacattggcgcagatctgaccgcgctcaccaccgaagcaggtatcattgccgtcaag
cgcatctttgatagcggtttcggtatcggtagtggtaccgatacccctcatgacagcgaa
caagggaccgtccccgaacccgatggtgcaggtatggaagccatggcgattgacgaccgc
tatacaccttttgccaacctgcccgacgacgtcaaggagacgcccatcgccaaattcctc
atgtcccatccaaccgccttgacttccgaccagctgtccaccatctccctcacccccgcc
gactttcttgccgcattaaagatcgtccagccttcggccaagcgtgaaggtttcgccacc
atccccgacgtcacctggtctgatatcggcgcgctcagtcagacccgagatgaactgcac
atggccattgtgcagcctatacggcacccggaactgtttagcgtcgtgggtatcgatgcg
ccaagtggtgtcctgctttggggaccccctggctgtggtaagacacttttagccaaggca
gtcgcgaatgagagtcgagcaaactttatctccgtcaagggcccagagttgctcaacaag
tatgttggcgagagtgaaagggcggtgaggcaagtatttgctcgggcacgatcatcttcc
ccctgtgtcatcttctttgacgagctggacgctctcgtgccccgtcgagacgattctatg
tctgaatcctcggcaagagtagtcaacacgctccttaccgaactcgacggtcttgatgct
cgtaaagccgtctatgtcatcggcgccactaaccgtccggacatgatcgaccccgccatg
gtccgacccggtcgtctcgacaaactcctctacgtcgacctgccttcaccttccgaacgt
ttcgaaatcctcaagacccacaccaagaagacgccgatcaacgaggattcatggcaagcg
atcaaggaaatcgtcgcttccgacaagtgcgatggcttttccggtgcggacattgcggcg
ctcgtgagggaagctgccacgctcgcactccgagccgctttggagagtataggcgcattc
gaaacaccggcagaggccgagccggaagggatcgagcgaaagacggattccgtcagggtc
acagctgaacattttgcccatgcagcacaaaagacgttaccgagtgtctccagggagcag
agattaaagtatgagaggatgagggacaagtatgcgggtgtgcctaccagagggagaagg
cagcgagaggctgaggctgaagctgcttctgttgctgctgctgccgccgccaagttagca
agtgccggtggagcgggaacggaggccagggtggaaggagaagggatggatgttgatgag
atgggcggggcgagaggaggaggtgtgaaagaaaaggcgtttgtcgcttag
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