Cryptococcus deneoformans JEC21: CNA07530
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Entry
CNA07530 CDS
T00243
Name
(RefSeq) 57.7 kda trp-asp repeats containing protein, putative
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CNA07530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNA07530
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CNA07530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_IFT140_1st
MIOS_WD40
Utp12
WDR54
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
3253546
NCBI-ProteinID:
XP_567103
UniProt:
Q5KN69
LinkDB
All DBs
Position
1:join(2059914..2060281,2060329..2061365,2061434..2061600)
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AA seq
523 aa
AA seq
DB search
MEFLPLRTLPAPPRQQSTTNPHSRHFHSFRHPLFIKHPAAITHIHFCPTKPHRYAVTSST
RVLIYAPKTGKVVKTITRFKDTARSGEFRKDGKLVVAGGDDGVVQVFDVNSRAILRTMKE
HNQPVRVTHFSPHLPQVLSASDDTTVKLWDLSTQACLSTFSSHTDYVRSSIFSPSDPSLI
LSASYDSTIRLHDVRLPEDEANVITMRHGGAPVEDILAFPSGGVAVSVGGPILRVWDLAM
AGKCVRALSNHQKTVTSVAFDGTKGRVLTGGLDNMVKVYDVEDWKVVHTMRYPAPVLSLA
VSPDDTHIAAGMTDGTLSVRRRDPKASELGASSAQETAIKGGAYEYFADMEAIFGTGHIK
AKGKDLGPVVGPADEFRVETRRQKRLRDFDKYLKSFKYSAALDAGLHKNVKPTTTFALIQ
ELVHRDALRIALSGRDDVTLEPILNFLAKNVTDPRFGEMAAQVVGVIIDIYTPILGQSPI
LDEMLGKIQTRVERELSFQRELMKLRGALDMTLSQAALGRVEA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagtttctgccgctgcgcaccctcccagcgccgccacgacaacaatcaacaacaaat
cctcattccagacactttcactcttttcgacaccccctcttcatcaaacacccggccgcc
atcacccatatccatttttgcccaacaaaaccacatcggtatgccgtgacatcttccaca
agagtgttgatctatgcaccgaagaccggaaaggtggtaaagactatcactaggttcaag
gacactgctcgaagcggagagtttaggaaagatggtaaattagtagttgctggtggagac
gatggtgttgttcaggtcttcgacgtgaacagtcgagcaatcttaagaacgatgaaagag
cataaccaacccgtccgagtcacccatttctccccgcatcttccccaagtgctctccgct
tccgacgatactacagtaaagctctgggacttgtccacacaagcatgtctctccaccttt
tcgtcccacaccgactatgttagatcatcaattttctccccttccgacccttccctgata
ctctctgcatcttatgattccactattcggctacacgacgtccgactgccagaagacgag
gctaatgtcattactatgcgacatggtggtgctcccgtggaggatatcttggcgttcccc
agtggaggtgtggctgtcagcgtcggtggacctatattgagagtttgggatcttgcaatg
gcaggcaagtgcgtgcgagcattgtccaatcaccaaaagaccgttacctcagttgccttt
gatggtacaaagggacgagtcttgaccggcggtctcgacaacatggtcaaggtctacgac
gttgaagactggaaggttgttcacaccatgcgttaccccgcacccgtcttatctctcgcg
gtttcccctgatgacacccacatcgcagctggtatgactgacggtaccctttccgttcgt
cggcgagatcccaaagcttctgagctcggcgcgtcttcagcgcaggaaacagctatcaag
ggtggcgcatatgaatactttgcagatatggaggcgatcttcgggacagggcacatcaag
gctaaggggaaagatttaggacctgtggttgggccggcagacgaatttagggtggagaca
agacggcaaaagaggctgagggactttgacaaatatttgaaatcattcaaatactctgcc
gctcttgacgcaggattacacaagaatgtcaagcccaccactacattcgctttgatccag
gagttggttcaccgtgatgctcttcggatagccctttccgggcgagacgatgttacactt
gaacctattctcaactttttggccaagaacgtcacagaccctcgattcggtgagatggcg
gcgcaggtcgtcggtgtcatcattgatatctacacaccaatcctcggccaatcgcctatt
ctcgatgaaatgctcggcaagattcagacacgggttgagagggagttgagtttccagaga
gagttgatgaagttaagaggggcactggatatgacattgtcacaggccgctttagggaga
gtcgaggcttag
DBGET
integrated database retrieval system
