Cryptococcus neoformans var. neoformans JEC21: CNA07860
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Entry
CNA07860 CDS
T00243
Name
(RefSeq) ATP-dependent RNA helicase ded1, putative
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNA07860
03041 Spliceosome [BR:
cne03041
]
CNA07860
03036 Chromosome and associated proteins [BR:
cne03036
]
CNA07860
Enzymes [BR:
cne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNA07860
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CNA07860
mRNA cycle factors
Common to processing body (P body) and stress granule
CNA07860
Spliceosome [BR:
cne03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CNA07860
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CNA07860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
3253536
NCBI-ProteinID:
XP_567133
UniProt:
P0CQ74
LinkDB
All DBs
Position
1:join(2169573..2169612,2169662..2170023,2170082..2171593)
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AA seq
637 aa
AA seq
DB search
MAATDVNGLASQMNSVNLNGASQKPQKPAYVPPHLRNRAAPPAAVPPAAPAAYRPSPTGL
PTPATTPPTRHIVPAAVAEDDVGGWGAQPRVRKTFEHGAPPGFGSWKNGQHVVGARNTRM
EKEMYGEVGDGLHQATGINFDKYADIPVEVSGKGVPEPVTEFTNPPINPVLLENVKYARY
ATPTPVQKYSIPIVADGRDLMACAQTGSGKTGGFLFPILSALFTYGPSTPPVEQDTGYGY
RRTKKVYPTALVLAPTRELVSQIHEEARKFAYRSWVRPAVVYGGADIGSQMRALDRGCDL
LSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMGFEPQIRRIVDEEDMPGVLERQTL
MFSATFPREIQNLARSFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKRSLLLDLLLAEQ
SGGLILVFVETKRMADTLCDFLCSRRHNATSIHGDRTQREREAALYAFKSGRAPILVATA
VAARGLDIPNVTHVILYDLPNDVAEYTHRIGRTGRAGNVGTSTAFFNRGNTNIGKDLIEL
LKEANQEVPQWLVEISSERSYGGGGGGGYKGSRGRSTGGGGGARLGGRDMRQGGGGYGGG
GRTSGYGGGYGGGGGGAGWGSGGGFPPAGGDSGASWW
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccgatgtcaatggactcgcgtcccaaatgaactccgttaaccttaacggt
gcctctcagaaacctcagaaacctgcctacgttcctcctcacttgaggaaccgtgccgct
ccccccgccgctgtccctcctgcggcccccgctgcctacaggccatctcccaccggtctc
cccactcccgccaccacccctcctaccaggcatattgtgcctgccgccgttgccgaggac
gatgtcggtggatggggtgcacaacctcgtgttaggaaaacttttgagcatggtgcccct
cccggatttggtagctggaagaatggccagcacgtcgtcggtgctaggaacacgaggatg
gagaaggaaatgtatggtgaagtgggagacggattgcaccaggccaccggtatcaacttt
gataagtacgccgatatccccgtcgaagtcagcggtaagggcgtccccgaacctgtgact
gaatttaccaacccccctatcaaccccgtccttctcgagaacgtcaagtacgctcgatac
gcaacccctacccctgttcaaaagtactccatccctatcgttgccgatggccgtgatctt
atggcttgtgcccaaaccggttccggtaaaactggtggtttccttttccccatcctttca
gctctcttcacctacggtccttccactcctcccgttgagcaggacactggctacggctac
aggaggacaaaaaaggtctaccccaccgcccttgttcttgcccctacccgagaacttgtc
tctcagattcacgaagaagctcgtaaattcgcctaccgatcttgggttcgacctgctgtc
gtttacggtggtgccgacattggctcccaaatgcgtgccctcgaccgaggatgtgacctt
ctttccgctacccctggtcgtcttgtcgacttgattgagcgaggcaagatcagtcttgct
aacgtcaagtacctcgttcttgacgaagccgaccgaatgctcgacatgggtttcgagcct
cagattagaagaatcgttgatgaggaagacatgcccggcgtccttgagcgtcagacgctc
atgttctccgccaccttccctcgagagatccagaaccttgctcgatctttcctcaaggag
tacatcttcttgaccgtcggtcgagtcggttctacttccgaaaacattacccagcgtgtt
gagtatgtcgatgaccaggacaagcgctctctgcttctcgacttgctccttgccgaacaa
tctggcggtttgatacttgtctttgtcgagacgaagcgcatggccgacactctctgtgac
ttcctctgttctcgtcgacacaatgccacctctatccacggtgaccgtacccagcgcgaa
cgtgaagctgctctctacgcattcaaatccggtcgagcccccattctcgttgctaccgcc
gtcgcggctcgaggtctcgatattcccaatgtcactcacgtcatcctttacgatcttccc
aacgatgttgccgagtacactcaccgtatcggccgaactggtcgtgcaggaaacgtcgga
acttcgactgccttcttcaaccgtggaaacaccaacattggtaaagatttgattgagctc
ctcaaagaggcgaaccaggaagtacctcagtggcttgttgaaatctcctctgagaggagt
tatggtggtggtggtggtggtgggtacaaaggaagtcgaggacgaagcactggtggcggc
ggcggtgcgaggttgggcggacgagatatgcgtcaaggtggcggtgggtacggcggtggt
ggaaggacttctgggtatggtgggggttacggtggtggtggcggtggtgccggatggggt
agtggcggtgggttcccacccgcgggtggcgactctggcgcgagctggtggtaa
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