Cryptococcus deneoformans JEC21: CNB00540
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Entry
CNB00540 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNB00540
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CNB00540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR5
WD40
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
DSE1_N
Beta-prop_WDR75_1st
B-prop_COPA_B_2nd
Beta-prop_VPS8
Beta-prop_Vps41
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
3255636
NCBI-ProteinID:
XP_569064
UniProt:
Q5KMT6
LinkDB
All DBs
Position
2:join(158621..159327,159382..159451,159503..160489,160550..160660)
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AA seq
624 aa
AA seq
DB search
MDALLAAAGPLPQKKGRPGKVHQRTPHPTSHKTVARGDGKDNIDSSTQSILSSTRLPHSF
HRSNLATGSSSAPIRPDGTLGRIGDKKLRAKIASQDVGNKRAKVERDDVNEWINKAIGGE
RGGIEVDEDLGEKTWRVKQEEIVKEVAMNVRGKKFDLKMEDMGSYKVDYTRNGRHLAIAS
SRGHVATFDWQAGKLHSEIHLKETVRDIKFLHSEAYYAVAQKKYVFIYDQNGVELHKLKQ
HIDPTHMEFLPFHYLLSTVGNAGYLKYHDTSTGVMLTQIPTRLGSPHSMTQNPHSAIIHL
GHANGTMTLWSPNMTTPHVKLLAHRGPVNGVAVDPSEHSAGRYVATSGMDGTVKLWDGRM
WGKEVREWKTRNQITSLAFSGMGMLSVGGKSGVTVYQDLYKNTHRPPSPYLTLPLPSLTA
SATRFCPFDDLLCVGHERGISSLIVPGSGEPNFDSAEADLFETRTRRREREVRGVLEKVR
PELITMDANFLGKISEGRGGETHEEREGRSFRQLGRLERLRLTGKADEPEQEGVDDEDAG
LEDGEADPNGGERSIREKKERRKMKGKGGSTKRYLRKKAKKNIVDNSLLQMKAKVAAQRA
SEEKKRKVERGEIVQETGALARFA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacgccctcttagcagctgctggtcctcttccccagaagaaggggagaccaggcaag
gtccatcagcgtactcctcatccgacctcccacaagactgtcgctcgtggagatggcaag
gacaatattgattcctcgacgcaatccatcttgagcagcacacggttaccacactctttc
caccgctccaacctcgctacaggatcgtcttcagcacctatccgacctgatggaactctc
ggaagaataggggacaagaaattgcgggcgaaaatcgcctcgcaagatgtgggcaacaag
cgggccaaagttgagagggatgacgtgaacgagtggataaacaaggctatcggaggtgag
agaggtgggattgaggtggatgaagatctaggggagaagacttggagagtcaaacaggag
gaaattgtgaaagaagtggcaatgaacgtcagggggaaaaagtttgatttgaaaatggag
gacatgggaagctacaaagtggattacactcggaacggcagacaccttgctatcgcttca
tctcgcggtcatgttgctactttcgactggcaagccggtaaactccattccgaaattcac
ctgaaggagactgttcgggacatcaagtttctccattctgaggcgtactatgctgtggct
cagaagaaatatgtctttatctacgaccaaaatggcgtggaattacataaactgaaacaa
catatcgaccctacgcatatggaatttttgcctttccactacctcttgtctactgtcggt
aacgccggttatctcaaatatcacgacacctccaccggtgtcatgttaactcaaatcccc
acccgtcttggttctcctcatagcatgacccaaaaccctcattctgctatcatccacctc
ggtcacgccaacggtaccatgacgttatggtctcccaacatgactactcctcatgtcaaa
cttttggctcatcgcggacctgtcaacggtgttgctgttgatccaagtgagcacagtgct
gggaggtacgttgcgacgagcgggatggacggtactgtcaagctttgggatgggcgtatg
tggggtaaggaagtgcgagaatggaaaacgaggaaccaaatcacatcgcttgccttttcc
ggcatgggtatgctcagtgttggtggaaagagcggtgtgacagtttaccaggacctttac
aaaaacactcatcgcccgccatctccctacctcacccttcctcttcctagcttgacagct
tctgccacccgtttctgcccctttgacgatctcctctgtgtcgggcatgaaagaggaata
tcatccctcatagtacctggttccggtgaacccaactttgacagtgcagaagccgacttg
ttcgagactcgtacaagaaggagggaacgagaagtccgtggtgtcctcgaaaaggtccga
ccggagcttatcacaatggatgccaactttttgggcaagattagtgaaggacggggtggg
gagactcatgaggagagggagggaaggagctttaggcagttgggaaggttggaaagattg
cgccttaccggtaaggcggatgagcccgagcaagagggtgttgacgatgaggacgctggg
ctggaagatggtgaggctgaccctaacggcggagagaggtcaataagagaaaagaaggaa
aggaggaagatgaagggcaagggcggtagtaccaagaggtacttgaggaagaaggcgaag
aaaaacattgtagacaactccttgttgcaaatgaaggccaaggtggcagcgcaacgagca
tcagaggagaagaagagaaaggtggaaaggggcgagatcgtccaggagactggggcgttg
gcgagattcgcttag
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