KEGG   Cryptococcus deneoformans JEC21: CNB00680
Entry
CNB00680          CDS       T00243                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III 8.3 kda polypeptide, putative
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03020  RNA polymerase
cne03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNB00680
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNB00680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cne03021]
    CNB00680
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNB00680
Transcription machinery [BR:cne03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CNB00680
  RNA polymerase III system
   RNA polymerase III
     CNB00680
  RNA polymerase I system
   RNA polymerase I
     CNB00680
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNB00680
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 3255974
NCBI-ProteinID: XP_569077
UniProt: Q5KMS2
LinkDB
Position
2:join(196410..196412,196469..196560,196616..196639,196711..196748,196801..196833,196893..196912)
AA seq 69 aa
MIIPVRCFSCGKVIGNLWDSYLELLAAGVDEGEAMDKLQLKRYCCRRMVLTHVDLIEKLL
MYNPLARDR
NT seq 210 nt   +upstreamnt  +downstreamnt
atgattattcccgtccgttgcttctcctgcggtaaggtcatcggtaacctttgggacagc
taccttgagctcctcgccgccggtgttgatgagggtgaggcgatggacaagttgcaattg
aagcgatattgctgtcgacgaatggtcctcacccacgtggatcttattgaaaagttgctg
atgtacaaccctctcgcacgggatcgatag

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