Cryptococcus deneoformans JEC21: CNB01070
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Entry
CNB01070 CDS
T00243
Name
(RefSeq) no arches protein, putative
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNB01070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNB01070
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNB01070
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CNB01070
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CNB01070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf-CCHC
zf-CCCH_4
zf_CCCH_4
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
3255804
NCBI-ProteinID:
XP_569113
UniProt:
P0CS64
LinkDB
All DBs
Position
2:complement(join(326288..326374,326426..326750,326806..327253,327303..327441))
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AA seq
332 aa
AA seq
DB search
MAAASNSAPLDPKLGRAADFVRPDFHQVNLDLENYLKTERNFKLDADQQICPLSITPLGC
PLPPSQCPYRHTTPSQLNFKPPPPLPAHPREREKKLTVCKHYLRNLCKMGDNCEYTHDFN
LRTMPVCIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDA
YAAGFCPDGKDCKLAHPSPNRPPAESYINPIPPDPEAFNGPPPQLPAGYGRWREYKYDPN
AVVVPAAAWVEGGSLSGWRAGGFLSANARRDNQRNRDNDDEGGRGSGGERKGGWQKDLST
VLCFRCNQYGHFANNCPNQYVPGDRGGGRRRE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcctcgaattccgcaccgttagatccaaagctcggacgagcagcagatttt
gttcgccctgacttccaccaagtcaatctcgacctggaaaactacctcaagactgagcgc
aacttcaagctcgatgcagaccaacaaatatgtcctctgtccatcacgcctctcggctgt
cctcttccgccttcacaatgtccttatcgtcacactaccccctcccaactcaatttcaag
ccaccacctcctctcccggctcaccctcgagagcgagaaaagaagctaacggtatgcaaa
cactaccttcgaaacctctgtaaaatgggagacaattgcgagtacacccacgactttaac
cttcgcaccatgccagtgtgtatatggtttgtcaaacaaggcaaatgtgagctgggagga
gagtgcctgtatttccaccccagagacagaagagttgagtgtccggattacaacagagga
ttctgcgtgctaggtcctaattgtccgaggaagcatataaggaggaggctgtgtgatgcc
tatgccgctggattttgccctgatggcaaggactgcaaattagctcacccgtctcccaac
cgaccgcctgcagaatcatatatcaaccctatcccacctgaccccgaagccttcaatggc
ccaccaccccaactgcctgctggctatggtcgttggcgggaatacaaatatgaccccaat
gcagtggttgttccagctgcggcgtgggttgagggtggaagtttatctggttggcgagct
ggaggatttctgtctgcgaatgcaagacgagataaccaaaggaatagagacaatgatgat
gagggtggacgcggcagcggaggagagagaaaaggtggctggcaaaaagatcttagcaca
gtgctttgtttcaggtgcaatcagtatggccactttgccaataactgtcctaatcaatat
gtgcctggagaccggggaggcggtagacgacgggaatga
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