Cryptococcus deneoformans JEC21: CNB01740
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Entry
CNB01740 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K14844
pumilio homology domain family member 6
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNB01740
03009 Ribosome biogenesis [BR:
cne03009
]
CNB01740
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
CNB01740
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CNB01740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
WHD_ROXA
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
3255722
NCBI-ProteinID:
XP_568842
UniProt:
Q5KMG9
LinkDB
All DBs
Position
2:join(514521..515078,515128..515751,515804..515904,515955..516292,516345..516793)
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AA seq
689 aa
AA seq
DB search
MAPKAAQKKRSAPDAGSAPKKTKVAQSDKSSKPAAPKQSKSRSAPREREEEAKKRKKPIT
QGGGEEEDEDVSMDEGSFSDEDQEDQETERNDVDMDDGDAQGAAPEKKRLSKAEKQALHA
AQPHRTTLLPSHPLLHDTLLPLWETARRADLSKEERKKAITELWEAVKGRVIEVSRGHKG
GRVLQTIVKYGGKEERLGVAMELEPQWKAMMESKYSKFLMSKLIRYCPSIRPLLIPHLAP
QLLNLLNHAHAVTPLSDLYELWASAKERRLLVRGFYPREVKIFDGAKQGVEVKGLEASLE
DMGEGKGRERVLDAIEKTVLDVFNATQKNALGQAIFHRLVLEYVQCIYKFLDGEASSKKM
HELLAAGAESFPEIVHTKDGSAVVRELIVRGNAKDRKQILQPLRKHVEALCKDGDAQMVL
FTAFDCVDDTKLMGKAFVSDIISLAPDLAFDKHGRRAIFYLLTPTSTRHFIHASLTSLAE
SAQKAKELGTSKKDMDVRRKELLSYANEGLVKLVEEKGEVMVRDPGAGLVVQEILLYAQG
DKSAAIQTLASALTLPYPDPAPLDPNPDPTVSHPLDLSHAIRTYKLLLSGGHFDHKTQTL
SIPDSSLSPAFSRAVWDALTSAEAGGAENIERVCKGNAPFVMVELIEGMKKRGDGEEVKK
ILGKKGVKETVEKSVRKGTALLAEKIGEL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaggcagctcagaagaagcgctcagctcccgatgctggttcagcacctaaa
aagaccaaagtcgcccagtctgacaaatcttcaaagcctgcagccccaaagcaatccaag
tctcgatctgctcctcgcgaacgggaggaagaggccaaaaaacgtaagaagcctatcacc
caggggggcggtgaagaagaagatgaggatgtgagcatggacgagggatcattctcagat
gaagaccaggaagaccaggaaaccgaacgtaacgatgttgacatggatgatggtgacgcc
caaggagctgcccctgaaaagaagcgtctgtcgaaagccgagaaacaagcccttcatgct
gctcaacctcacagaacgactctcttgccttcccatcctcttttgcatgacaccctttta
cctctgtgggaaactgccagaagagctgatttgagcaaggaggagaggaagaaggctatc
actgaactttgggaagctgtcaaggggagagtcatcgaggtatccaggggccataaaggt
ggtcgagtattacagaccattgttaaatatggtggcaaggaagagcgtctgggcgttgct
atggagcttgaacctcagtggaaggccatgatggaatccaagtactccaaattcctcatg
tccaagctcattcgatactgcccgtctatccgccctttgctcatcccccatctcgcccct
cagcttctcaatcttcttaaccacgcgcacgctgtcacccccctttccgacctctacgag
ctctgggcatccgccaaggagcgtagactgcttgtgaggggtttctatcctagggaagtc
aaaatcttcgacggtgctaagcagggcgttgaggtcaagggtttagaggcgagtttggaa
gatatgggtgagggtaagggccgggaacgggtgctggacgctatcgagaagaccgtcttg
gacgtcttcaacgccacacaaaagaacgctcttggtcaagcaatcttccaccgccttgtt
ctcgaatatgtccagtgcatctataagttccttgacggcgaggcctcctccaaaaagatg
cacgagctgttggccgctggtgccgaaagtttccctgaaatcgtccacactaaagacggt
tcagctgttgtccgagagttgatcgtcagagggaatgccaaggatcgtaaacaaatactg
cagcctttgaggaagcatgtcgaggcgctttgcaaggatggtgatgcccagatggtcctt
ttcactgcatttgactgtgttgatgacaccaagcttatgggcaaagcctttgtctctgac
attatttctctcgctcctgaccttgctttcgataagcatggccgacgtgccatattctat
ctccttacgcctacctccacccgtcacttcattcacgcctccctgacttcgctcgctgag
tcggcacaaaaagccaaggagcttggtactagcaagaaagacatggacgtgagacgcaag
gagcttttgagctatgccaacgaagggctagtgaagcttgttgaggaaaaaggagaagta
atggttagggatcccggagctggtttggttgtccaggaaatcttgctttatgctcaaggc
gacaaaagtgccgctatccagactctcgcatccgccctcactctaccctatcctgacccc
gctcctctcgaccccaaccctgatcctacggtctcccaccctcttgatctctcgcacgcc
attcgtacctataagctactcctatccggcggtcattttgaccacaagacacaaacactc
tctattcccgattcctctctttctcccgctttttcacgtgcagtttgggatgctctcacg
agtgccgaagccggtggtgcggagaacattgagagagtctgcaaaggcaatgcgccattt
gtgatggtcgagttgattgaaggcatgaagaaacgaggagatggagaagaggtcaagaag
atcttgggcaaaaagggagttaaggagactgtcgagaagagtgttcgaaagggaacggct
ctgttggcagagaagattggggagctttag
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