KEGG   Cryptococcus neoformans var. neoformans JEC21: CNB02560
Entry
CNB02560          CDS       T00243                                 
Name
(RefSeq) cleavage stimulation factor, 77kDa subunit, putative
  KO
K14408  cleavage stimulation factor subunit 3
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CNB02560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cne03019]
    CNB02560
Messenger RNA biogenesis [BR:cne03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     CNB02560
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_PRP39_C TPR_14 HAT_Syf1_CNRKL1_N PT TPR_8 TPR_2 TLN1-like_RS
Other DBs
NCBI-GeneID: 3255985
NCBI-ProteinID: XP_569179
UniProt: P0CO12
LinkDB
Position
2:complement(join(744919..744965,745022..745156,745219..745890,745945..746082,746138..746216,746278..746650,746699..747207,747255..747560,747613..747725,747778..748600))
AA seq 1064 aa
MSHEHPAEIVHQLQSIDSIQQDLADTAAAVVDAASQSLPPQHAAQDQKSHSTLLDNAEAM
ESILESAIPAAPGSSSTAAASDAIGDNNFTASGPPPISNTVVAPSAADDETGDVIVVESE
TPTTTNVVEAVVNPENDGDVPIESTEQSSGQPAEQPTEQPTEQPTEQPAEQPAVETPQAP
QSTPAAPAASAVESIPTTLEETHLEQIVQAPAPTVHTEPLTPVVDIKMEEKPMIEHVAWI
PPQGIHSDVFLPEGLTEYSPSVSQNGELIRSWRADPSNPTLLLSLFNWAVQKTEVEDARA
WYRVLAVDNPTAAQPLLALINLELALSNFAEVEAIFASTLKGSAGITTAADVSIWAAYLH
YIRRQNPLTEGSANAADVRSTITEAYEFALRECGFDRESGDIWDEYIKFVASGPATNQWD
TQAKNDNLRKIYQRAVCIPLNNIEALWKSYDNFESSLNKLTAKKYLAEKSPAYMTARTAL
RELRALSDPIPKPILPPYPTFTEQDRQVVGAWKACLRWEEGNPLVIENHELLQSRIGYAL
RKCLGEMRHFPELWHYAASYYSKLGKQDEAAEILEAGVNACPKSFLLTFAYAELQEERKA
FPTCHSLYTTLISKLNPEVDELRQNVAREIDIARGPPIPGSEKAAVAAAVGDSIDADGND
ISDIQRLVEEREQRGALVAQRRGKDIEELMVGISVVWIMYMRFARRAEGIKAARGVFGKA
RKSPHLTWQVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDN
NARALFERSVVRIMGDKARPLWDAWARYEYTYGDLSAVHKLEARMSEVFPEDAPLKRFAQ
RWSYNGIDQIAIRDLGFNRARMGVAAPPAFAIAPVLPPVHASIPAPIAVPTPVQPPQESY
KRPAPEDIPPRRPSSAEFSRSPKRHRAQSPPRRYPERDDRPPPGRYRDSLPPVKAPSSIP
PPPLAGPAYATPSSGAYGGDKDRSGLEKPLAWFMAQLPNARSFDGPVFRPDDIMKLFGGL
SLPGAGMPPAPPISRGPPPPPMQSRGYYEPERDRRYGGHGSGRY
NT seq 3195 nt   +upstreamnt  +downstreamnt
atgtcacacgaacaccccgcagagatcgtccaccagctgcaatcaatagactccatccag
caggacctcgcagacacagccgctgccgtcgtcgatgctgcctcccaaagccttcccccc
caacatgctgcacaagatcaaaaatcccactcaaccctgttggacaatgcagaggcaatg
gagtctattcttgaaagtgccataccggcagctccaggttcatcgtctaccgctgcagca
tctgatgccattggagataacaattttactgcgtctggtcctcctcctatttccaatact
gtcgttgctccatctgctgcagatgacgaaactggagacgtgattgtcgttgaaagcgag
actcctacaactaccaatgtcgtagaggcagttgtcaacccagaaaatgatggcgatgtc
ccgatagagtccacagaacagtcctcaggacagcccgcagaacagcccacagaacagccc
acagaacaacccacagaacagcccgcagaacaacctgctgtcgaaacacctcaagcaccc
caatccactcctgctgcacccgccgcatctgccgttgaaagtatcccaaccaccttggag
gaaactcatcttgagcaaatagtgcaagcacctgccccaactgttcatactgagcctctg
acgcctgtggtcgacatcaaaatggaagaaaagcctatgatcgaacacgtcgcatggata
ccacctcaaggaatccactctgatgtatttctcccggaaggtctgacggaatattcccca
agtgtgagccaaaatggcgaactgatcaggtcttggcgtgctgatcctagtaacccgacc
ctgttactttctctcttcaactgggccgtccaaaaaacggaagtggaggatgctagggct
tggtatcgggttctggcggttgataatccgactgcggcccaaccgctgctcgctttgatc
aatttggagttagctctttccaacttcgccgaagtagaggctatctttgccagtacactc
aagggaagcgctgggataacaactgcggccgacgttagtatctgggccgcgtatctccat
tacatccggcgacaaaaccctcttactgagggttcagccaatgctgctgatgtcagatca
acgatcactgaggcttatgagtttgcgcttcgagagtgtggatttgaccgagagagcgga
gatatctgggatgagtacatcaagtttgttgcgagtggtcctgctaccaatcaatgggac
acgcaagccaaaaatgataaccttcgaaagatctatcagcgagctgtttgtattcccctc
aacaacattgaggctctatggaagtcttacgacaattttgaatcttccctcaataagctt
accgccaagaaatatctcgctgaaaagtctcctgcttatatgacagctcgtaccgccctt
cgcgagcttcgtgcgctttcggacccgatccccaaacctatcctgcctccgtatcccact
ttcacagaacaggacaggcaggttgttggtgcttggaaagcatgtctgagatgggaagaa
gggaatccactggttattgagaatcacgagctgttgcaatccaggattgggtatgcattg
agaaagtgtttgggtgaaatgagacattttccagagctctggcactatgccgctagctat
tactccaagttgggtaaacaggacgaggctgcagagattctcgaagccggtgtgaatgct
tgtcctaaaagcttcctcctcacgtttgcttacgctgagcttcaagaagagcgcaaagct
ttcccgacttgtcattcactctatactaccctcatctctaaactgaatcccgaagtcgat
gagctccgccagaacgttgctcgtgaaattgacattgctcgcggtccccctattcctggc
tctgaaaaggctgcagtagctgctgccgttggcgacagcattgacgctgacggtaatgat
ataagcgatatccagaggctcgtggaggaacgggaacagagaggggcgcttgtggcgcaa
aggagagggaaggacatcgaagaactgatggttggcataagtgtcgtatggataatgtac
atgaggtttgctcgcagggcagagggtatcaaggccgctagaggagtatttgggaaggct
cggaagtcgcctcatcttacgtggcaagtatttgaagcatcagctttaatggaataccac
accaacaaggacgccgctgttgctattagaattttcgaattgggtctgaagcagttctcc
gaggatgttgactatgtgatcaaataccttcaattccttttgtcgattaacgacgataac
aacgctcgagctctctttgaacgttcggttgtcaggattatgggcgacaaggctcgacct
ctatgggatgcttgggctcgttatgaatacacctacggtgacctgtctgcggtacacaaa
cttgaagctcgcatgtctgaagtcttccccgaggatgctcctctcaagcgtttcgcacaa
agatggtcatacaacggaatcgatcaaattgctattcgggatcttggcttcaaccgtgct
cgaatgggcgttgctgcgcctcctgcatttgccatcgctcctgttctcccgccggttcat
gcttctattcccgcccctattgccgtccctaccccagtgcagcctcctcaagaatcatac
aaacgtcctgctcccgaagatatccccccacgacggccttcctctgcagaattctctcgt
tctcccaagcgtcatcgtgcgcagtctccccctcgccgttatcctgagcgtgatgaccgt
cctcctccaggccgatatcgtgactcactcccgcctgtcaaggccccatcaagcattcca
ccacctcctctcgcaggaccagcgtatgcaacaccttccagtggagcgtacgggggcgac
aaagacaggagtggtctagaaaagcctctggcgtggttcatggcacaactgcccaatgct
cgttcatttgatggccctgttttccgtcctgacgatataatgaagcttttcggtggactt
tctctgccaggtgcaggtatgccccctgcacctcctatcagcagaggtcctcccccgcca
cccatgcaaagtagaggatattatgaacctgaaagggacagaagatatgggggacatgga
agcggaaggtactga

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