Entry |
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Name |
(RefSeq) cleavage stimulation factor, 77kDa subunit, putative
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KO |
K14408 | cleavage stimulation factor subunit 3 |
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Organism |
cne Cryptococcus neoformans var. neoformans JEC21
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cne00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNB02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cne03019]
CNB02560
Messenger RNA biogenesis [BR:cne03019]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CNB02560
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:complement(join(744919..744965,745022..745156,745219..745890,745945..746082,746138..746216,746278..746650,746699..747207,747255..747560,747613..747725,747778..748600))
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AA seq |
1064 aa
MSHEHPAEIVHQLQSIDSIQQDLADTAAAVVDAASQSLPPQHAAQDQKSHSTLLDNAEAM
ESILESAIPAAPGSSSTAAASDAIGDNNFTASGPPPISNTVVAPSAADDETGDVIVVESE
TPTTTNVVEAVVNPENDGDVPIESTEQSSGQPAEQPTEQPTEQPTEQPAEQPAVETPQAP
QSTPAAPAASAVESIPTTLEETHLEQIVQAPAPTVHTEPLTPVVDIKMEEKPMIEHVAWI
PPQGIHSDVFLPEGLTEYSPSVSQNGELIRSWRADPSNPTLLLSLFNWAVQKTEVEDARA
WYRVLAVDNPTAAQPLLALINLELALSNFAEVEAIFASTLKGSAGITTAADVSIWAAYLH
YIRRQNPLTEGSANAADVRSTITEAYEFALRECGFDRESGDIWDEYIKFVASGPATNQWD
TQAKNDNLRKIYQRAVCIPLNNIEALWKSYDNFESSLNKLTAKKYLAEKSPAYMTARTAL
RELRALSDPIPKPILPPYPTFTEQDRQVVGAWKACLRWEEGNPLVIENHELLQSRIGYAL
RKCLGEMRHFPELWHYAASYYSKLGKQDEAAEILEAGVNACPKSFLLTFAYAELQEERKA
FPTCHSLYTTLISKLNPEVDELRQNVAREIDIARGPPIPGSEKAAVAAAVGDSIDADGND
ISDIQRLVEEREQRGALVAQRRGKDIEELMVGISVVWIMYMRFARRAEGIKAARGVFGKA
RKSPHLTWQVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDN
NARALFERSVVRIMGDKARPLWDAWARYEYTYGDLSAVHKLEARMSEVFPEDAPLKRFAQ
RWSYNGIDQIAIRDLGFNRARMGVAAPPAFAIAPVLPPVHASIPAPIAVPTPVQPPQESY
KRPAPEDIPPRRPSSAEFSRSPKRHRAQSPPRRYPERDDRPPPGRYRDSLPPVKAPSSIP
PPPLAGPAYATPSSGAYGGDKDRSGLEKPLAWFMAQLPNARSFDGPVFRPDDIMKLFGGL
SLPGAGMPPAPPISRGPPPPPMQSRGYYEPERDRRYGGHGSGRY |
NT seq |
3195 nt +upstreamnt +downstreamnt
atgtcacacgaacaccccgcagagatcgtccaccagctgcaatcaatagactccatccag
caggacctcgcagacacagccgctgccgtcgtcgatgctgcctcccaaagccttcccccc
caacatgctgcacaagatcaaaaatcccactcaaccctgttggacaatgcagaggcaatg
gagtctattcttgaaagtgccataccggcagctccaggttcatcgtctaccgctgcagca
tctgatgccattggagataacaattttactgcgtctggtcctcctcctatttccaatact
gtcgttgctccatctgctgcagatgacgaaactggagacgtgattgtcgttgaaagcgag
actcctacaactaccaatgtcgtagaggcagttgtcaacccagaaaatgatggcgatgtc
ccgatagagtccacagaacagtcctcaggacagcccgcagaacagcccacagaacagccc
acagaacaacccacagaacagcccgcagaacaacctgctgtcgaaacacctcaagcaccc
caatccactcctgctgcacccgccgcatctgccgttgaaagtatcccaaccaccttggag
gaaactcatcttgagcaaatagtgcaagcacctgccccaactgttcatactgagcctctg
acgcctgtggtcgacatcaaaatggaagaaaagcctatgatcgaacacgtcgcatggata
ccacctcaaggaatccactctgatgtatttctcccggaaggtctgacggaatattcccca
agtgtgagccaaaatggcgaactgatcaggtcttggcgtgctgatcctagtaacccgacc
ctgttactttctctcttcaactgggccgtccaaaaaacggaagtggaggatgctagggct
tggtatcgggttctggcggttgataatccgactgcggcccaaccgctgctcgctttgatc
aatttggagttagctctttccaacttcgccgaagtagaggctatctttgccagtacactc
aagggaagcgctgggataacaactgcggccgacgttagtatctgggccgcgtatctccat
tacatccggcgacaaaaccctcttactgagggttcagccaatgctgctgatgtcagatca
acgatcactgaggcttatgagtttgcgcttcgagagtgtggatttgaccgagagagcgga
gatatctgggatgagtacatcaagtttgttgcgagtggtcctgctaccaatcaatgggac
acgcaagccaaaaatgataaccttcgaaagatctatcagcgagctgtttgtattcccctc
aacaacattgaggctctatggaagtcttacgacaattttgaatcttccctcaataagctt
accgccaagaaatatctcgctgaaaagtctcctgcttatatgacagctcgtaccgccctt
cgcgagcttcgtgcgctttcggacccgatccccaaacctatcctgcctccgtatcccact
ttcacagaacaggacaggcaggttgttggtgcttggaaagcatgtctgagatgggaagaa
gggaatccactggttattgagaatcacgagctgttgcaatccaggattgggtatgcattg
agaaagtgtttgggtgaaatgagacattttccagagctctggcactatgccgctagctat
tactccaagttgggtaaacaggacgaggctgcagagattctcgaagccggtgtgaatgct
tgtcctaaaagcttcctcctcacgtttgcttacgctgagcttcaagaagagcgcaaagct
ttcccgacttgtcattcactctatactaccctcatctctaaactgaatcccgaagtcgat
gagctccgccagaacgttgctcgtgaaattgacattgctcgcggtccccctattcctggc
tctgaaaaggctgcagtagctgctgccgttggcgacagcattgacgctgacggtaatgat
ataagcgatatccagaggctcgtggaggaacgggaacagagaggggcgcttgtggcgcaa
aggagagggaaggacatcgaagaactgatggttggcataagtgtcgtatggataatgtac
atgaggtttgctcgcagggcagagggtatcaaggccgctagaggagtatttgggaaggct
cggaagtcgcctcatcttacgtggcaagtatttgaagcatcagctttaatggaataccac
accaacaaggacgccgctgttgctattagaattttcgaattgggtctgaagcagttctcc
gaggatgttgactatgtgatcaaataccttcaattccttttgtcgattaacgacgataac
aacgctcgagctctctttgaacgttcggttgtcaggattatgggcgacaaggctcgacct
ctatgggatgcttgggctcgttatgaatacacctacggtgacctgtctgcggtacacaaa
cttgaagctcgcatgtctgaagtcttccccgaggatgctcctctcaagcgtttcgcacaa
agatggtcatacaacggaatcgatcaaattgctattcgggatcttggcttcaaccgtgct
cgaatgggcgttgctgcgcctcctgcatttgccatcgctcctgttctcccgccggttcat
gcttctattcccgcccctattgccgtccctaccccagtgcagcctcctcaagaatcatac
aaacgtcctgctcccgaagatatccccccacgacggccttcctctgcagaattctctcgt
tctcccaagcgtcatcgtgcgcagtctccccctcgccgttatcctgagcgtgatgaccgt
cctcctccaggccgatatcgtgactcactcccgcctgtcaaggccccatcaagcattcca
ccacctcctctcgcaggaccagcgtatgcaacaccttccagtggagcgtacgggggcgac
aaagacaggagtggtctagaaaagcctctggcgtggttcatggcacaactgcccaatgct
cgttcatttgatggccctgttttccgtcctgacgatataatgaagcttttcggtggactt
tctctgccaggtgcaggtatgccccctgcacctcctatcagcagaggtcctcccccgcca
cccatgcaaagtagaggatattatgaacctgaaagggacagaagatatgggggacatgga
agcggaaggtactga |