Cryptococcus deneoformans JEC21: CNB03050
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Entry
CNB03050 CDS
T00243
Name
(RefSeq) pre-mRNA splicing factor, putative
KO
K11096
small nuclear ribonucleoprotein D2
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNB03050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cne03041
]
CNB03050
03032 DNA replication proteins [BR:
cne03032
]
CNB03050
Spliceosome [BR:
cne03041
]
Complex A
U1 snRNP components
Sm proteins
CNB03050
U2 snRNP components
CNB03050
Complex B
U1 snRNP components
CNB03050
U4/U6.U5 tri-snRNP components
CNB03050
Complex C
U2 snRNP components
CNB03050
DNA replication proteins [BR:
cne03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CNB03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Curto_V2
Hfq
Motif
Other DBs
NCBI-GeneID:
3256044
NCBI-ProteinID:
XP_569020
UniProt:
Q5KM44
LinkDB
All DBs
Position
2:complement(join(925522..925541,925597..925631,925686..925747,925825..926038,926096..926100))
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AA seq
111 aa
AA seq
DB search
MSQYAHVPKSELDEAQIRELEEYEISQGPLSVLQQSVRNSSQVLISLRNNKKLLARVKAF
DRHCNMVLENVKEMWTETPKGKGKKPVNKDRFISKMFLRGDSVILVLRNAA
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatacgcccacgtccctaaatccgagcttgacgaagcccaaatacgagagctt
gaagagtatgaaatctctcaaggccctttatcggtccttcaacaatccgtccgcaactct
tctcaggtacttatctcactgcggaataacaagaaacttctggcgagagtgaaggcgttc
gacaggcattgcaacatggtcttggagaacgtaaaggaaatgtggacggagacaccaaag
ggcaaagggaaaaagccggtgaacaaggaccgtttcatctcaaaaatgtttcttcgaggt
gactctgtgattcttgttcttcgtaatgcagcctag
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