Cryptococcus neoformans var. neoformans JEC21: CNB04060
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Entry
CNB04060 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K14304
nuclear pore complex protein Nup85
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNB04060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNB04060
03036 Chromosome and associated proteins [BR:
cne03036
]
CNB04060
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNB04060
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CNB04060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF4479
Motif
Other DBs
NCBI-GeneID:
3255817
NCBI-ProteinID:
XP_024512294
UniProt:
Q5KLU4
LinkDB
All DBs
Position
2:join(1194070..1194303,1194346..1194702,1194753..1195372,1195442..1196118,1196175..1196477,1196539..1196825)
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AA seq
825 aa
AA seq
DB search
MFSSSQPTQSLSRHSQPSANNDISMDAERQGQTPVQTLYLKPEAYPRGGKEKWKATGRTI
SAAAGPVGGELAVWVTKRPSDDPNKPAKLTNADPTVSDEAIIFASINSLPQPLIQLYTES
HLLFTSLQQIVADSGRRRLSSVGFGVNGGAESWDTKGNFGVEGLLGPPDAETVINMRRLA
DFYVDQLGDLKALPDIDAGLRDRFIDAYNIFNIAEILYLPIDGKGEGLVGEELLDWVNEI
DVAPDNQLGNEIMSTLHSWDHPSFWPYISRSILRGFHLPAASFLRSLSSHPYAPISKLAV
LLAQHLTILPRSSETKWRIDMDFLQAHKQWLAKFKSELATQLGGKGEGKWFEGEWVNWEG
DFRCVVELMEGKMERVLEEAGDWREALGAWGILVDVDMRRDHLPEVMSIITERIPVDKSL
PDHVVQSALCSADIIKALMSCYSLDTWLSAHLADLLDKLSLIPDDEEHFEISLRDFFLLE
YAQVLQDNPNYKAFWRVICDYLGYAGEEGRGRLKEHLKRLDIPLDRDVKGKSKESPDSTN
DEQQGLDASMDIENPTESQGEAIKLLDEVRSACVDFRLDDVWQEISQVLATRLISAGQYG
MAATLALMARDGFALSKIADKVLESFITHGQDEYLALVDTLPPTLLAEAPTALLHLQQST
SNPTEFPSHSAVSVFASRITFLSEFRDYLLFLSQDARDRAAEKVISLLTSGIAPVGFWAV
LLVESIALLEDSEILFSSNETFELLRVLEEVYANAAFAEEEYLGQLVQYLQRTLNTPAAE
EEGHIIKKNEKKVTVKDAKRRMEEVRLAISRNLARAMVAGFDSPF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgttctcctcctcccagccaacacaatccttgtcgagacattcgcagccgtccgcaaac
aacgacatctctatggacgccgaaaggcaaggccagacgcctgtacagactctttacctg
aaaccagaagcctatcctcgaggcggcaaggaaaagtggaaggccacaggacgtacaatc
agcgctgcagccggaccagttggcggtgaattagcagtatgggtcactaaaaggccttca
gacgacccaaataagcctgcaaagctcaccaatgccgacccaacagtctcagacgaagcc
atcatctttgcgtctatcaactctttaccacagcctctaatccaactatataccgagtca
catctgttgttcacctcacttcaacaaatcgtcgccgattccggtcgacggcggctgtcg
tctgtcgggttcggtgtcaatggaggtgcagagtcatgggatacaaaagggaactttgga
gtggagggattgttgggtccgcctgatgcagagacggtcatcaatatgaggaggctggct
gatttctatgtcgaccaattgggagacctcaaggcattgcctgatattgatgccgggctg
agagatcggtttatcgatgcttacaacattttcaacattgccgaaatcctctatcttccc
atagacggcaagggcgaaggtcttgtgggtgaagaactcctcgactgggtcaacgaaatc
gacgtcgcacctgacaaccaactcggtaacgaaatcatgtccaccttgcattcatgggac
catccttcgttttggccgtatatctcccgctctatcctccgtggcttccacctccccgct
gcttctttcctccgatcactttcttcccacccctacgcgcccatctccaagctcgccgtg
ttgttggctcaacatctcaccatccttcctcggtcatcggagactaaatggagaatcgat
atggatttcctacaagcacataaacagtggctcgccaagttcaagtctgaacttgcgact
caattaggcggaaaaggggagggcaaatggtttgaaggtgaatgggttaattgggaggga
gatttcagatgtgtggtagagctgatggagggaaagatggagagggtcttggaagaagca
ggtgattggagagaagccttgggtgcttggggtatccttgttgatgttgacatgcgaagg
gaccacttgcccgaggtcatgtctatcattacagagaggattcctgtggacaaatccctc
cctgaccacgtcgttcaatccgccctttgctccgcagatatcatcaaagctctcatgagc
tgctactctctcgatacatggctctccgcccatctcgctgatctgttagataaactgtcg
ctcatcccggacgacgaagagcactttgaaatttccttgcgagacttctttttgctagag
tatgcgcaagtgttgcaagataatccgaattacaaggcgttctggagggtgatttgtgat
tacttgggatatgcaggtgaagaaggaaggggaaggttgaaggagcatttgaaaaggttg
gatattcctcttgacagggatgtaaaaggaaaatccaaggaatcgcctgactccaccaat
gacgaacaacaaggtctcgacgcttcaatggacattgagaacccaaccgagtcccaaggg
gaagcgatcaaactcctcgatgaagtccgttccgcctgtgtcgatttccgtctcgatgac
gtatggcaagaaatcagtcaagtgctggctacgcggctgattagcgccgggcaatatggt
atggcggcgacgttggctttgatggctagggatggattcgcattgtccaagatcgcggac
aaggtcttggagtctttcatcacccatggtcaagacgagtacctggcccttgttgatacc
ctccctcctacactactcgccgaagcacccaccgccctcttacatctccaacaatccact
tccaaccccaccgaatttccttctcattctgctgtgagcgtgtttgcatcgagaatcaca
tttctatccgaattcagagattacctcttgtttttgagccaggatgcgagagatcgagct
gcggagaaggtgatcagtcttttgacaagtgggattgcacccgtgggtttctgggcggtt
ttgttggtggaaagtattgcgttgctggaagattctgagatattattctcttccaacgaa
acgtttgagctcctgcgcgtacttgaagaagtatacgcaaatgccgcttttgcagaggaa
gagtacctcggtcaactcgttcagtacctccagcggacgctcaatacaccggcagcagag
gaagaagggcacattattaagaagaacgagaaaaaggtaacggtgaaggatgcgaaaaga
aggatggaagaagtgagattggcgataagtagaaatttggcgagagcgatggtcgccgga
ttcgacagtcccttttag
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