Cryptococcus neoformans var. neoformans JEC21: CNB04370
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Entry
CNB04370 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNB04370
03036 Chromosome and associated proteins [BR:
cne03036
]
CNB04370
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CNB04370
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CNB04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
HHH_9
CTD
SH2
HHH_3
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
3255639
NCBI-ProteinID:
XP_568934
UniProt:
P0CR72
LinkDB
All DBs
Position
2:join(1271582..1272174,1272227..1272353,1272403..1274574,1274624..1275803,1275856..1275995,1276052..1276360)
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AA seq
1506 aa
AA seq
DB search
MSDRPGSASEGEGDEIRPYGEDRDSSEESEDDDPEEAKRIAEGFIVDEDEEDGEGEDDEE
DEETRRRRRKEEKRRRKKERRMRREREEAELSEDELELIEENRGLREGRPLKRLRRRSGS
EGSENDRAVPTLQDMFRDDEDRMEDDDDDLMDFIEEDEEDEANQGETEEQRRERKRAEKL
KRREQARSRPELTGVDRSSWDEIFAVFGDGQDYDWALEGEDGMDLDEEEEAAKKDLRLED
VFDPAEIKARRLQDEDKAVANADRPERHQIVNSTLSDNPVFATDTLYPPPDFAAKWVAPK
VSFRTQYLFYNQHPEGSYPIPTIDNPQPYPVYRRPDLEIEFEKAVSTALNMMFVQHLEVP
YLWHYKRDVFSLLENQGQSSVLFLERDELWQVYVLGQRYRAIHERNEQTRQQWGKIKARK
GDIEDEYFTKGLLGKACVASIEAAGEGDEWLAYHYASDIKAIKEEEAFDEVSKKLPERAE
REDIRRGRIMKLVEAFGIDANKVASSFQDVHGQPAPVMNPDKMPLELADEFTGAAYSSPE
QALSAASFVLVQELSKDPAIRQQARDFMDTCGLVTVNATDRGMSVIDQYHLYYNFKFLTN
KPVLDFRDSPQFVHMLKAEEEGLINIAFDIREDMLASFTDALIRCCRSNDYGEIASAWNE
VRMEVCNTLVKKHLMPMASKWIKEHLRTQAEEYIAERCREELELRVNVRPYASSGMEQGE
TPSVLAITNGKGDIRDAVMAVMLDDEGNVRTQTKFDNLRDEEDKTMFIELLEKRKPKVVV
IGGFSAQTARLKDAALVAIRQHAIELLGQNPPVSDAYPDHEGFQYAMAEYDEKLKAHLIP
LIFVNDATARLYMSSEEAEKEHPNLPLNGRYALGLARYAQNPLNAYCKLGKHIASVTFME
HHQKLIPQEKLLYHLERGLVNSVCFMGIEINSCVADPYQRAMLPYIAGLGPRKADAVIYG
IQKHGALINRMAFTDLGLFGPTIFENTAGFLTIESDLKDMMLEAENPQEQPDPLDMTRIH
PENYEFAQKMCQDALDLDVEDVADRHKSEVVQTLMLDDKRGKKLGELNLDDFAFNLQRQG
EGNKRHTLGEIVSELIRYRSDRRPAFYVPTDWEIVTMVTGETERTVGRGLKVTATVRKAI
SARVFCQLESGLDAVLERDYVADEDQAPVTSCDEVFKPRQAIKGVVIMPEPARFQVRIST
RPSDLRQGVDFVQPFKDEEYNSKDRRDAAEAATAAKKQRRAGKVQRIVNHPNWHVLNSGQ
AEQFLASQHRGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNEYSLGRILMVSG
QYRYSDLDDLIINHVKATARKFDEIQMHEKYKPEHELDAFLKNYVQAHPGRSIYGFSVDS
DRPGYLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGVTELSNAFKMQYSEKLAE
QGHQGKTPGIYLGKTPMHLGGRTPALGSRTPAMGSRTPALGSRTPALGSRTPALGSRTPA
QGGPRY
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaggcctggctccgcctctgaaggcgaaggtgacgaaatccgaccatatggc
gaagaccgcgactcatctgaagaatccgaagatgatgaccccgaagaggccaagcggatc
gctgaaggattcatagtcgatgaagacgaggaagacggagaaggagaagacgacgaggaa
gatgaagagacaaggcggagacgaaggaaggaagagaaacgacgtaggaagaaggaaaga
agaatgaggagagaaagagaggaagcagagttgtcggaagatgagctggaactgatagaa
gaaaatcgtggcctgcgtgaaggaagaccgttgaagagactgaggaggcgtagtggatct
gaagggtcagagaatgacagggctgtgcccactcttcaagacatgtttcgagatgatgaa
gaccgaatggaggatgacgacgacgatctcatggacttcattgaggaggacgaagaggat
gaggccaaccaaggagagacggaagagcagagaagagaaaggaagagggcggaaaagttg
aagaggagagaacaggctaggagccgtccagaattgactggagtagaccgatcttcatgg
gatgagatttttgctgtgtttggcgatggtcaagattacgattgggcgctcgagggcgag
gacggtatggatttggatgaagaagaagaggcagctaagaaggacctccgtctagaagat
gtgttcgaccctgccgaaatcaaagcaaggagattacaagatgaagataaggctgttgcc
aacgccgatcgacctgagaggcaccaaattgtgaactctaccttatccgacaatcccgtc
ttcgccaccgataccctttacccacctcctgattttgccgcgaaatgggttgcgcccaag
gtgtctttccgtactcaatatctcttttacaatcagcatcccgaaggatcttaccctatc
cctactattgataatcctcagccttatcctgtctatcgccgacctgatctcgagatagaa
ttcgaaaaggctgtatccaccgctctcaacatgatgttcgtgcagcacttagaggtaccc
tacctgtggcactacaagcgcgacgtattcagtttgttggagaatcaaggacagagctct
gtgcttttcttggagcgagatgaactttggcaggtttatgtccttggtcaacgctaccga
gcaattcacgaaaggaatgagcaaaccaggcaacagtgggggaaaatcaaagcgcgaaaa
ggtgatattgaggatgaatatttcaccaagggattgctcggtaaagcttgtgtggcgagc
attgaagcagctggagaaggcgatgaatggcttgcataccactatgcgtctgatatcaag
gcaatcaaggaggaagaagcctttgacgaggtatcgaagaagttaccagagagggcagag
cgcgaagatattaggagagggaggattatgaaattggttgaggcctttggtatcgacgcc
aataaagtcgcttcatccttccaggatgtccatggtcaaccggcgcctgtaatgaatccg
gacaagatgcctctcgagttggcggacgaatttacaggtgcagcatactcaagccctgaa
caagctctctctgccgctagctttgttcttgtccaagagctgtccaaggacccggctatc
cgtcagcaagctcgagacttcatggatacctgcggtctagtcacagtcaatgccactgat
aggggcatgtcagtaatcgaccagtatcacctttactacaattttaaattcctcaccaac
aaacctgttctcgatttcagggacagtcctcaattcgttcacatgctcaaggccgaggag
gagggtcttataaacattgcattcgatatccgtgaagacatgctcgcatcattcactgat
gccctcatccgatgttgtcgatcgaatgactacggggagattgcctcggcctggaatgaa
gtcaggatggaggtttgcaatacattagtaaagaagcacttgatgcccatggcctccaag
tggattaaggagcatctcaggactcaggccgaggagtacattgctgaacgatgtcgagaa
gaattagaactgcgtgtcaatgtccgaccctacgcctcatcgggcatggagcaaggtgaa
accccctcagtccttgccatcaccaacgggaaaggtgatatccgagatgccgtcatggct
gtcatgctcgacgacgaaggcaacgtacgcactcaaaccaaatttgacaatttgcgtgac
gaggaggacaagacaatgttcatagagttgctggaaaagcgaaagcccaaggttgtcgtc
attggtggtttttctgcccaaactgcccgtctcaaagacgctgctctggttgctattcgc
cagcatgccatagaacttctaggtcaaaacccaccagtatcagatgcttatcctgaccac
gagggatttcagtatgctatggcggaatacgacgagaaactcaaggcgcatctaattcct
cttatttttgttaatgacgcgaccgcgaggttgtacatgtcttcagaagaggctgagaaa
gaacaccccaacttgcccttgaatggacgatatgctttgggtttggcgaggtatgctcaa
aatcccttgaatgcgtattgcaaactgggtaaacatattgcctcagtaaccttcatggag
catcaccaaaagcttattcctcaagagaagcttctttaccatctcgaacgaggtctcgtg
aactcagtctgcttcatgggtatagagattaactcatgtgtggctgatccttatcagcgg
gcaatgctgccatacattgctggtctcggccccagaaaggcagatgctgtgatatatggt
atccagaagcatggcgcccttatcaatcgtatggcgttcactgaccttggtctctttgga
cctacgatctttgaaaacactgctggtttccttacaatagaatctgacctcaaggacatg
atgctggaagccgaaaacccccaagagcagcccgaccctcttgatatgactcgaattcat
cccgagaactacgagttcgcccaaaagatgtgtcaagatgctctcgatctcgacgttgag
gatgtggcagatcgacacaagtcagaagtcgtccagactcttatgcttgatgataagcgg
gggaagaagctaggagagctcaacttggatgattttgctttcaatcttcagcgacaaggt
gaaggtaataagcgtcacactctcggagagatcgttagcgaattgatcagataccgatct
gatcgacgacccgccttctacgtccctactgactgggagatcgtgactatggtcacggga
gagactgaaaggactgttgggagaggattgaaggtgacggcaaccgtcagaaaagccatt
tcggctcgagttttctgccagctcgaatcaggtttggacgctgttctcgagcgagattac
gtcgccgacgaggatcaagctccagtcacctcttgcgacgaagtattcaaacctcgccaa
gctatcaagggtgtcgtcatcatgcctgaacctgctcgtttccaagtacgtatatcaact
cgaccctctgatctccggcaaggtgtcgattttgtccaacctttcaaagatgaggaatat
aacagtaaagatcgtcgggatgcggctgaggcggctaccgctgcgaagaagcagcgaaga
gcgggcaaggttcagcgtatcgtcaaccaccccaactggcatgttcttaactctggtcag
gccgagcaattccttgcaagccagcatcgaggtgactgtgtcatacgaccctcatctaag
ggtcctgatcgcattgcggtgacctggaaggttgatgaggatgtttatcaacacattgat
gtacaagagatagacaagccaaatgaatactctctgggaaggatcctgatggtcagcggt
caatacagatatagtgatctggatgacttgatcattaaccacgtcaaagcgaccgcgagg
aagtttgatgagattcaaatgcacgagaagtacaagccggagcacgagcttgatgctttc
ctgaagaactatgtgcaagcccatcctggaagaagtatctatggcttcagcgttgacagc
gatcggccaggatacctcaagctttgcttcctcagcaagcctacaaaagacggcggtgtc
attcaaacctggcctgtccgagtccttcctggtgcctataagcttggtaacgctatcgtc
cctggtgtcaccgagctcagcaatgcattcaagatgcaatattctgaaaagcttgcagaa
caaggccaccaaggcaaaaccccgggtatttaccttggtaaaactcccatgcatcttggt
gggcgaacgcctgccctagggtctaggacccctgctatgggttctaggactcctgctcta
ggctccagaacgccagcccttggatcaaggacaccagctctggggtccagaactcccgct
cagggaggaccgaggtattaa
DBGET
integrated database retrieval system
